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  1. Transcript 'KH2012:KH.C10.10.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.nonSL6-1

Possible name(s)

FAU; RPS27A; UBB

Gene model

KH2012:KH.C10.10

Location

KhC10 [827,281 / 828,062]

Sequences

Amino acid sequence

Length: 147

>KH.C10.10.v1.A.nonSL6-1
VYCKPCLKGFNSTNMQIFLKTNELHCVQVDSGDLVSNLKAQINAIEGIATEDQVLSYNGI
TLDDDLSLEAAGLNDLSTVQVLGRVLGGKVHGSLARAGKVKGQTPKVEAQEKKKKKTGRA
KRRMQYNRRFVNVVATFGRRRGPNANS

Nucleotide sequence

Length: 781

>KH2012:KH.C10.10.v1.A.nonSL6-1
GTTTATTGTAAACCTTGTTTAAAAGGGTTTAATTCAACCAATATGCAGATATTTTTGAAA
ACAAATGAGTTGCACTGCGTGCAGGTCGATAGTGGAGACCTCGTGTCTAACCTAAAGGCC
CAAATCAACGCGATTGAAGGTATCGCAACCGAAGACCAAGTATTAAGCTACAATGGAATT
ACGTTGGACGACGATTTGAGCTTGGAAGCTGCTGGTTTAAACGACCTTTCCACTGTTCAA
GTTTTGGGACGCGTACTTGGAGGTAAAGTGCACGGTTCTTTGGCACGTGCTGGTAAAGTG
AAGGGTCAAACACCAAAAGTTGAGGCCCAAGAAAAGAAGAAAAAGAAGACTGGCCGAGCC
AAACGTCGCATGCAATACAACAGGAGATTCGTGAATGTTGTTGCCACCTTTGGTCGTCGA
CGTGGACCAAACGCCAACTCCTAAACTGTTTGTCCAATTTCTGCTATCTCGTGTATGTTG
AATCATATGTAAAGTAGCAGATAATAAATAAAAAAACGAAACCACCTAATTATGTCTTTT
ATCCAAAACAAAAGCGATTCAGTTTACTATTGTCATGATATCTCTTAAAAACTATTTTGT
TACATAGAACTTCCACTGTAAGATTTCACTGCATGTTTAAACAGTCATTGTATAGTATCT
CCATGTCTACTTATCTTCCTGTACAAAATCCCTGCACAATAATATATGCTTTTACCTAAT
AACTATATTCTCAAGAAGTAAACCGGTTATAGGGTTGTGTGTATTAAAGAAAAACACAAA
G

InterProScan

SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[10-89] 7.37E-17
ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[15-88] 17.234
SMART
Ubiquitin_dom (IPR000626) - T[15-84] 2.7E-12
Pfam
Ubiquitin_dom (IPR000626) - T[17-84] 1.0E-12
Pfam
Ribosomal_S30 (IPR006846) - T[89-146] 2.3E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS30_HUMAN 88.136 % 89.7 1.06E-24
UBIM_HUMAN 41.892 % 67.4 6.88E-16