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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C10.10.v1....' > 
  2. Transcript 'KH2012:KH.C1.1020.v1...' > 
  3. Transcript 'KH2012:KH.C1.1066.v1...' > 
  4. Transcript 'KH2012:KH.C10.10.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.nonSL5-1

Possible name(s)

FAU; RPS27A; UBB

Gene model

KH2012:KH.C10.10

Location

KhC10 [827,281 / 828,092]

Sequences

Amino acid sequence

Length: 157

>KH.C10.10.v1.A.nonSL5-1
SFSRCCKTIGVYCKPCLKGFNSTNMQIFLKTNELHCVQVDSGDLVSNLKAQINAIEGIAT
EDQVLSYNGITLDDDLSLEAAGLNDLSTVQVLGRVLGGKVHGSLARAGKVKGQTPKVEAQ
EKKKKKTGRAKRRMQYNRRFVNVVATFGRRRGPNANS

Nucleotide sequence

Length: 811

>KH2012:KH.C10.10.v1.A.nonSL5-1
TCCTTTTCCCGTTGTTGTAAAACCATCGGTGTTTATTGTAAACCTTGTTTAAAAGGGTTT
AATTCAACCAATATGCAGATATTTTTGAAAACAAATGAGTTGCACTGCGTGCAGGTCGAT
AGTGGAGACCTCGTGTCTAACCTAAAGGCCCAAATCAACGCGATTGAAGGTATCGCAACC
GAAGACCAAGTATTAAGCTACAATGGAATTACGTTGGACGACGATTTGAGCTTGGAAGCT
GCTGGTTTAAACGACCTTTCCACTGTTCAAGTTTTGGGACGCGTACTTGGAGGTAAAGTG
CACGGTTCTTTGGCACGTGCTGGTAAAGTGAAGGGTCAAACACCAAAAGTTGAGGCCCAA
GAAAAGAAGAAAAAGAAGACTGGCCGAGCCAAACGTCGCATGCAATACAACAGGAGATTC
GTGAATGTTGTTGCCACCTTTGGTCGTCGACGTGGACCAAACGCCAACTCCTAAACTGTT
TGTCCAATTTCTGCTATCTCGTGTATGTTGAATCATATGTAAAGTAGCAGATAATAAATA
AAAAAACGAAACCACCTAATTATGTCTTTTATCCAAAACAAAAGCGATTCAGTTTACTAT
TGTCATGATATCTCTTAAAAACTATTTTGTTACATAGAACTTCCACTGTAAGATTTCACT
GCATGTTTAAACAGTCATTGTATAGTATCTCCATGTCTACTTATCTTCCTGTACAAAATC
CCTGCACAATAATATATGCTTTTACCTAATAACTATATTCTCAAGAAGTAAACCGGTTAT
AGGGTTGTGTGTATTAAAGAAAAACACAAAG

InterProScan

SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[19-99] 8.06E-17
ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[25-98] 17.234
SMART
Ubiquitin_dom (IPR000626) - T[25-94] 2.7E-12
Pfam
Ubiquitin_dom (IPR000626) - T[27-94] 1.2E-12
Pfam
Ribosomal_S30 (IPR006846) - T[99-156] 2.6E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS30_HUMAN 88.136 % 89.4 1.63E-24
UBIM_HUMAN 41.892 % 67.4 9.45E-16