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  1. Transcript 'KH2012:KH.C10.10.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.nonSL4-1

Possible name(s)

FAU; RPS27A; UBB

Gene model

KH2012:KH.C10.10

Location

KhC10 [827,281 / 828,097]

Sequences

Amino acid sequence

Length: 158

>KH.C10.10.v1.A.nonSL4-1
CSFSRCCKTIGVYCKPCLKGFNSTNMQIFLKTNELHCVQVDSGDLVSNLKAQINAIEGIA
TEDQVLSYNGITLDDDLSLEAAGLNDLSTVQVLGRVLGGKVHGSLARAGKVKGQTPKVEA
QEKKKKKTGRAKRRMQYNRRFVNVVATFGRRRGPNANS

Nucleotide sequence

Length: 816

>KH2012:KH.C10.10.v1.A.nonSL4-1
CTTGTTCCTTTTCCCGTTGTTGTAAAACCATCGGTGTTTATTGTAAACCTTGTTTAAAAG
GGTTTAATTCAACCAATATGCAGATATTTTTGAAAACAAATGAGTTGCACTGCGTGCAGG
TCGATAGTGGAGACCTCGTGTCTAACCTAAAGGCCCAAATCAACGCGATTGAAGGTATCG
CAACCGAAGACCAAGTATTAAGCTACAATGGAATTACGTTGGACGACGATTTGAGCTTGG
AAGCTGCTGGTTTAAACGACCTTTCCACTGTTCAAGTTTTGGGACGCGTACTTGGAGGTA
AAGTGCACGGTTCTTTGGCACGTGCTGGTAAAGTGAAGGGTCAAACACCAAAAGTTGAGG
CCCAAGAAAAGAAGAAAAAGAAGACTGGCCGAGCCAAACGTCGCATGCAATACAACAGGA
GATTCGTGAATGTTGTTGCCACCTTTGGTCGTCGACGTGGACCAAACGCCAACTCCTAAA
CTGTTTGTCCAATTTCTGCTATCTCGTGTATGTTGAATCATATGTAAAGTAGCAGATAAT
AAATAAAAAAACGAAACCACCTAATTATGTCTTTTATCCAAAACAAAAGCGATTCAGTTT
ACTATTGTCATGATATCTCTTAAAAACTATTTTGTTACATAGAACTTCCACTGTAAGATT
TCACTGCATGTTTAAACAGTCATTGTATAGTATCTCCATGTCTACTTATCTTCCTGTACA
AAATCCCTGCACAATAATATATGCTTTTACCTAATAACTATATTCTCAAGAAGTAAACCG
GTTATAGGGTTGTGTGTATTAAAGAAAAACACAAAG

InterProScan

SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[20-100] 8.06E-17
SMART
Ubiquitin_dom (IPR000626) - T[26-95] 2.7E-12
ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[26-99] 17.234
Pfam
Ubiquitin_dom (IPR000626) - T[28-95] 1.2E-12
Pfam
Ribosomal_S30 (IPR006846) - T[100-157] 2.7E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS30_HUMAN 88.136 % 89.7 1.45E-24