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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.530.v1....' > 
  2. Clone 'cien45860' > 
  3. Transcript 'KH2012:KH.C9.53.v3.R...' > 
  4. Clone 'ma303k23' > 
  5. Transcript 'KH2012:KH.C10.10.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.nonSL33-1

Possible name(s)

FAU; RPS27A; UBB

Gene model

KH2012:KH.C10.10

Location

KhC10 [827,281 / 828,028]

Sequences

Amino acid sequence

Length: 135

>KH.C10.10.v1.A.nonSL33-1
TNMQIFLKTNELHCVQVDSGDLVSNLKAQINAIEGIATEDQVLSYNGITLDDDLSLEAAG
LNDLSTVQVLGRVLGGKVHGSLARAGKVKGQTPKVEAQEKKKKKTGRAKRRMQYNRRFVN
VVATFGRRRGPNANS

Nucleotide sequence

Length: 747

>KH2012:KH.C10.10.v1.A.nonSL33-1
CAACCAATATGCAGATATTTTTGAAAACAAATGAGTTGCACTGCGTGCAGGTCGATAGTG
GAGACCTCGTGTCTAACCTAAAGGCCCAAATCAACGCGATTGAAGGTATCGCAACCGAAG
ACCAAGTATTAAGCTACAATGGAATTACGTTGGACGACGATTTGAGCTTGGAAGCTGCTG
GTTTAAACGACCTTTCCACTGTTCAAGTTTTGGGACGCGTACTTGGAGGTAAAGTGCACG
GTTCTTTGGCACGTGCTGGTAAAGTGAAGGGTCAAACACCAAAAGTTGAGGCCCAAGAAA
AGAAGAAAAAGAAGACTGGCCGAGCCAAACGTCGCATGCAATACAACAGGAGATTCGTGA
ATGTTGTTGCCACCTTTGGTCGTCGACGTGGACCAAACGCCAACTCCTAAACTGTTTGTC
CAATTTCTGCTATCTCGTGTATGTTGAATCATATGTAAAGTAGCAGATAATAAATAAAAA
AACGAAACCACCTAATTATGTCTTTTATCCAAAACAAAAGCGATTCAGTTTACTATTGTC
ATGATATCTCTTAAAAACTATTTTGTTACATAGAACTTCCACTGTAAGATTTCACTGCAT
GTTTAAACAGTCATTGTATAGTATCTCCATGTCTACTTATCTTCCTGTACAAAATCCCTG
CACAATAATATATGCTTTTACCTAATAACTATATTCTCAAGAAGTAAACCGGTTATAGGG
TTGTGTGTATTAAAGAAAAACACAAAG

InterProScan

ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[3-76] 17.234
SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[3-90] 6.45E-17
SMART
Ubiquitin_dom (IPR000626) - T[3-72] 2.7E-12
Pfam
Ubiquitin_dom (IPR000626) - T[5-72] 8.0E-13
Pfam
Ribosomal_S30 (IPR006846) - T[77-134] 1.9E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS30_HUMAN 88.136 % 90.1 4.88E-25
UBIM_HUMAN 41.892 % 67.8 4.65E-16