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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C10.10.v1....' > 
  2. Transcript 'KH2012:KH.C10.10.v1....' > 
  3. Transcript 'KH2012:KH.C10.10.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.nonSL32-1

Possible name(s)

FAU; RPS27A; UBB

Gene model

KH2012:KH.C10.10

Location

KhC10 [827,281 / 828,078]

Sequences

Amino acid sequence

Length: 152

>KH.C10.10.v1.A.nonSL32-1
CKTIGVYCKPCLKGFNSTNMQIFLKTNELHCVQVDSGDLVSNLKAQINAIEGIATEDQVL
SYNGITLDDDLSLEAAGLNDLSTVQVLGRVLGGKVHGSLARAGKVKGQTPKVEAQEKKKK
KTGRAKRRMQYNRRFVNVVATFGRRRGPNANS

Nucleotide sequence

Length: 797

>KH2012:KH.C10.10.v1.A.nonSL32-1
TTGTAAAACCATCGGTGTTTATTGTAAACCTTGTTTAAAAGGGTTTAATTCAACCAATAT
GCAGATATTTTTGAAAACAAATGAGTTGCACTGCGTGCAGGTCGATAGTGGAGACCTCGT
GTCTAACCTAAAGGCCCAAATCAACGCGATTGAAGGTATCGCAACCGAAGACCAAGTATT
AAGCTACAATGGAATTACGTTGGACGACGATTTGAGCTTGGAAGCTGCTGGTTTAAACGA
CCTTTCCACTGTTCAAGTTTTGGGACGCGTACTTGGAGGTAAAGTGCACGGTTCTTTGGC
ACGTGCTGGTAAAGTGAAGGGTCAAACACCAAAAGTTGAGGCCCAAGAAAAGAAGAAAAA
GAAGACTGGCCGAGCCAAACGTCGCATGCAATACAACAGGAGATTCGTGAATGTTGTTGC
CACCTTTGGTCGTCGACGTGGACCAAACGCCAACTCCTAAACTGTTTGTCCAATTTCTGC
TATCTCGTGTATGTTGAATCATATGTAAAGTAGCAGATAATAAATAAAAAAACGAAACCA
CCTAATTATGTCTTTTATCCAAAACAAAAGCGATTCAGTTTACTATTGTCATGATATCTC
TTAAAAACTATTTTGTTACATAGAACTTCCACTGTAAGATTTCACTGCATGTTTAAACAG
TCATTGTATAGTATCTCCATGTCTACTTATCTTCCTGTACAAAATCCCTGCACAATAATA
TATGCTTTTACCTAATAACTATATTCTCAAGAAGTAAACCGGTTATAGGGTTGTGTGTAT
TAAAGAAAAACACAAAG

InterProScan

SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[14-94] 7.6E-17
ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[20-93] 17.234
SMART
Ubiquitin_dom (IPR000626) - T[20-89] 2.7E-12
Pfam
Ubiquitin_dom (IPR000626) - T[22-89] 1.1E-12
Pfam
Ribosomal_S30 (IPR006846) - T[94-151] 2.4E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS30_HUMAN 88.136 % 89.7 1.31E-24
UBIM_HUMAN 41.892 % 67.4 8.8E-16