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TRANSCRIPT CARD

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  1. Clone 'cien132209' > 
  2. Transcript 'KH2012:KH.C10.10.v1....' > 
  3. Transcript 'KH2012:KH.C9.53.v8.B...' > 
  4. Transcript 'KH2012:KH.C10.10.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.nonSL3-1

Possible name(s)

FAU; RPS27A; UBB

Gene model

KH2012:KH.C10.10

Location

KhC10 [827,281 / 828,091]

Sequences

Amino acid sequence

Length: 156

>KH.C10.10.v1.A.nonSL3-1
FSRCCKTIGVYCKPCLKGFNSTNMQIFLKTNELHCVQVDSGDLVSNLKAQINAIEGIATE
DQVLSYNGITLDDDLSLEAAGLNDLSTVQVLGRVLGGKVHGSLARAGKVKGQTPKVEAQE
KKKKKTGRAKRRMQYNRRFVNVVATFGRRRGPNANS

Nucleotide sequence

Length: 810

>KH2012:KH.C10.10.v1.A.nonSL3-1
CCTTTTCCCGTTGTTGTAAAACCATCGGTGTTTATTGTAAACCTTGTTTAAAAGGGTTTA
ATTCAACCAATATGCAGATATTTTTGAAAACAAATGAGTTGCACTGCGTGCAGGTCGATA
GTGGAGACCTCGTGTCTAACCTAAAGGCCCAAATCAACGCGATTGAAGGTATCGCAACCG
AAGACCAAGTATTAAGCTACAATGGAATTACGTTGGACGACGATTTGAGCTTGGAAGCTG
CTGGTTTAAACGACCTTTCCACTGTTCAAGTTTTGGGACGCGTACTTGGAGGTAAAGTGC
ACGGTTCTTTGGCACGTGCTGGTAAAGTGAAGGGTCAAACACCAAAAGTTGAGGCCCAAG
AAAAGAAGAAAAAGAAGACTGGCCGAGCCAAACGTCGCATGCAATACAACAGGAGATTCG
TGAATGTTGTTGCCACCTTTGGTCGTCGACGTGGACCAAACGCCAACTCCTAAACTGTTT
GTCCAATTTCTGCTATCTCGTGTATGTTGAATCATATGTAAAGTAGCAGATAATAAATAA
AAAAACGAAACCACCTAATTATGTCTTTTATCCAAAACAAAAGCGATTCAGTTTACTATT
GTCATGATATCTCTTAAAAACTATTTTGTTACATAGAACTTCCACTGTAAGATTTCACTG
CATGTTTAAACAGTCATTGTATAGTATCTCCATGTCTACTTATCTTCCTGTACAAAATCC
CTGCACAATAATATATGCTTTTACCTAATAACTATATTCTCAAGAAGTAAACCGGTTATA
GGGTTGTGTGTATTAAAGAAAAACACAAAG

InterProScan

SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[18-98] 8.06E-17
SMART
Ubiquitin_dom (IPR000626) - T[24-93] 2.7E-12
ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[24-97] 17.234
Pfam
Ubiquitin_dom (IPR000626) - T[26-93] 1.1E-12
Pfam
Ribosomal_S30 (IPR006846) - T[98-155] 2.6E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS30_HUMAN 88.136 % 89.7 1.48E-24
UBIM_HUMAN 41.892 % 67.4 9.71E-16