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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C10.10.v1....' > 
  2. Transcript 'KH2012:KH.C10.10.v1....' > 
  3. Transcript 'KH2012:KH.C10.10.v1....' > 
  4. Transcript 'KH2012:KH.C10.10.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.nonSL30-1

Possible name(s)

FAU; RPS27A; UBB

Gene model

KH2012:KH.C10.10

Location

KhC10 [827,281 / 828,104]

Sequences

Amino acid sequence

Length: 161

>KH.C10.10.v1.A.nonSL30-1
SKSCSFSRCCKTIGVYCKPCLKGFNSTNMQIFLKTNELHCVQVDSGDLVSNLKAQINAIE
GIATEDQVLSYNGITLDDDLSLEAAGLNDLSTVQVLGRVLGGKVHGSLARAGKVKGQTPK
VEAQEKKKKKTGRAKRRMQYNRRFVNVVATFGRRRGPNANS

Nucleotide sequence

Length: 823

>KH2012:KH.C10.10.v1.A.nonSL30-1
AGCAAATCTTGTTCCTTTTCCCGTTGTTGTAAAACCATCGGTGTTTATTGTAAACCTTGT
TTAAAAGGGTTTAATTCAACCAATATGCAGATATTTTTGAAAACAAATGAGTTGCACTGC
GTGCAGGTCGATAGTGGAGACCTCGTGTCTAACCTAAAGGCCCAAATCAACGCGATTGAA
GGTATCGCAACCGAAGACCAAGTATTAAGCTACAATGGAATTACGTTGGACGACGATTTG
AGCTTGGAAGCTGCTGGTTTAAACGACCTTTCCACTGTTCAAGTTTTGGGACGCGTACTT
GGAGGTAAAGTGCACGGTTCTTTGGCACGTGCTGGTAAAGTGAAGGGTCAAACACCAAAA
GTTGAGGCCCAAGAAAAGAAGAAAAAGAAGACTGGCCGAGCCAAACGTCGCATGCAATAC
AACAGGAGATTCGTGAATGTTGTTGCCACCTTTGGTCGTCGACGTGGACCAAACGCCAAC
TCCTAAACTGTTTGTCCAATTTCTGCTATCTCGTGTATGTTGAATCATATGTAAAGTAGC
AGATAATAAATAAAAAAACGAAACCACCTAATTATGTCTTTTATCCAAAACAAAAGCGAT
TCAGTTTACTATTGTCATGATATCTCTTAAAAACTATTTTGTTACATAGAACTTCCACTG
TAAGATTTCACTGCATGTTTAAACAGTCATTGTATAGTATCTCCATGTCTACTTATCTTC
CTGTACAAAATCCCTGCACAATAATATATGCTTTTACCTAATAACTATATTCTCAAGAAG
TAAACCGGTTATAGGGTTGTGTGTATTAAAGAAAAACACAAAG

InterProScan

SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[22-103] 8.29E-17
SMART
Ubiquitin_dom (IPR000626) - T[29-98] 2.7E-12
ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[29-102] 17.234
Pfam
Ubiquitin_dom (IPR000626) - T[31-98] 1.2E-12
Pfam
Ribosomal_S30 (IPR006846) - T[103-160] 2.8E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS30_HUMAN 88.136 % 89.7 1.32E-24
UBIM_HUMAN 41.892 % 67.4 9.96E-16