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  1. Transcript 'KH2012:KH.C10.10.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.nonSL29-1

Possible name(s)

FAU; RPS27A; UBB

Gene model

KH2012:KH.C10.10

Location

KhC10 [827,281 / 828,032]

Sequences

Amino acid sequence

Length: 137

>KH.C10.10.v1.A.nonSL29-1
NSTNMQIFLKTNELHCVQVDSGDLVSNLKAQINAIEGIATEDQVLSYNGITLDDDLSLEA
AGLNDLSTVQVLGRVLGGKVHGSLARAGKVKGQTPKVEAQEKKKKKTGRAKRRMQYNRRF
VNVVATFGRRRGPNANS

Nucleotide sequence

Length: 751

>KH2012:KH.C10.10.v1.A.nonSL29-1
AATTCAACCAATATGCAGATATTTTTGAAAACAAATGAGTTGCACTGCGTGCAGGTCGAT
AGTGGAGACCTCGTGTCTAACCTAAAGGCCCAAATCAACGCGATTGAAGGTATCGCAACC
GAAGACCAAGTATTAAGCTACAATGGAATTACGTTGGACGACGATTTGAGCTTGGAAGCT
GCTGGTTTAAACGACCTTTCCACTGTTCAAGTTTTGGGACGCGTACTTGGAGGTAAAGTG
CACGGTTCTTTGGCACGTGCTGGTAAAGTGAAGGGTCAAACACCAAAAGTTGAGGCCCAA
GAAAAGAAGAAAAAGAAGACTGGCCGAGCCAAACGTCGCATGCAATACAACAGGAGATTC
GTGAATGTTGTTGCCACCTTTGGTCGTCGACGTGGACCAAACGCCAACTCCTAAACTGTT
TGTCCAATTTCTGCTATCTCGTGTATGTTGAATCATATGTAAAGTAGCAGATAATAAATA
AAAAAACGAAACCACCTAATTATGTCTTTTATCCAAAACAAAAGCGATTCAGTTTACTAT
TGTCATGATATCTCTTAAAAACTATTTTGTTACATAGAACTTCCACTGTAAGATTTCACT
GCATGTTTAAACAGTCATTGTATAGTATCTCCATGTCTACTTATCTTCCTGTACAAAATC
CCTGCACAATAATATATGCTTTTACCTAATAACTATATTCTCAAGAAGTAAACCGGTTAT
AGGGTTGTGTGTATTAAAGAAAAACACAAAG

InterProScan

SMART
Ubiquitin_dom (IPR000626) - T[5-74] 2.7E-12
SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[5-92] 6.68E-17
ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[5-78] 17.234
Pfam
Ubiquitin_dom (IPR000626) - T[7-74] 8.4E-13
Pfam
Ribosomal_S30 (IPR006846) - T[79-136] 1.9E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS30_HUMAN 88.136 % 90.1 5.11E-25
UBIM_HUMAN 41.892 % 67.8 4.24E-16