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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C10.10.v1....' > 
  2. Transcript 'KH2012:KH.C10.10.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.nonSL27-1

Possible name(s)

FAU; RPS27A; UBB

Gene model

KH2012:KH.C10.10

Location

KhC10 [827,281 / 828,065]

Sequences

Amino acid sequence

Length: 148

>KH.C10.10.v1.A.nonSL27-1
GVYCKPCLKGFNSTNMQIFLKTNELHCVQVDSGDLVSNLKAQINAIEGIATEDQVLSYNG
ITLDDDLSLEAAGLNDLSTVQVLGRVLGGKVHGSLARAGKVKGQTPKVEAQEKKKKKTGR
AKRRMQYNRRFVNVVATFGRRRGPNANS

Nucleotide sequence

Length: 784

>KH2012:KH.C10.10.v1.A.nonSL27-1
GGTGTTTATTGTAAACCTTGTTTAAAAGGGTTTAATTCAACCAATATGCAGATATTTTTG
AAAACAAATGAGTTGCACTGCGTGCAGGTCGATAGTGGAGACCTCGTGTCTAACCTAAAG
GCCCAAATCAACGCGATTGAAGGTATCGCAACCGAAGACCAAGTATTAAGCTACAATGGA
ATTACGTTGGACGACGATTTGAGCTTGGAAGCTGCTGGTTTAAACGACCTTTCCACTGTT
CAAGTTTTGGGACGCGTACTTGGAGGTAAAGTGCACGGTTCTTTGGCACGTGCTGGTAAA
GTGAAGGGTCAAACACCAAAAGTTGAGGCCCAAGAAAAGAAGAAAAAGAAGACTGGCCGA
GCCAAACGTCGCATGCAATACAACAGGAGATTCGTGAATGTTGTTGCCACCTTTGGTCGT
CGACGTGGACCAAACGCCAACTCCTAAACTGTTTGTCCAATTTCTGCTATCTCGTGTATG
TTGAATCATATGTAAAGTAGCAGATAATAAATAAAAAAACGAAACCACCTAATTATGTCT
TTTATCCAAAACAAAAGCGATTCAGTTTACTATTGTCATGATATCTCTTAAAAACTATTT
TGTTACATAGAACTTCCACTGTAAGATTTCACTGCATGTTTAAACAGTCATTGTATAGTA
TCTCCATGTCTACTTATCTTCCTGTACAAAATCCCTGCACAATAATATATGCTTTTACCT
AATAACTATATTCTCAAGAAGTAAACCGGTTATAGGGTTGTGTGTATTAAAGAAAAACAC
AAAG

InterProScan

SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[11-90] 7.37E-17
SMART
Ubiquitin_dom (IPR000626) - T[16-85] 2.7E-12
ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[16-89] 17.234
Pfam
Ubiquitin_dom (IPR000626) - T[18-85] 1.0E-12
Pfam
Ribosomal_S30 (IPR006846) - T[90-147] 2.3E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS30_HUMAN 88.136 % 89.4 1.27E-24
UBIM_HUMAN 41.892 % 67.4 7.79E-16