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  1. Transcript 'KH2012:KH.C10.10.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.nonSL26-1

Possible name(s)

FAU; RPS27A; UBB

Gene model

KH2012:KH.C10.10

Location

KhC10 [827,281 / 828,076]

Sequences

Amino acid sequence

Length: 151

>KH.C10.10.v1.A.nonSL26-1
KTIGVYCKPCLKGFNSTNMQIFLKTNELHCVQVDSGDLVSNLKAQINAIEGIATEDQVLS
YNGITLDDDLSLEAAGLNDLSTVQVLGRVLGGKVHGSLARAGKVKGQTPKVEAQEKKKKK
TGRAKRRMQYNRRFVNVVATFGRRRGPNANS

Nucleotide sequence

Length: 795

>KH2012:KH.C10.10.v1.A.nonSL26-1
GTAAAACCATCGGTGTTTATTGTAAACCTTGTTTAAAAGGGTTTAATTCAACCAATATGC
AGATATTTTTGAAAACAAATGAGTTGCACTGCGTGCAGGTCGATAGTGGAGACCTCGTGT
CTAACCTAAAGGCCCAAATCAACGCGATTGAAGGTATCGCAACCGAAGACCAAGTATTAA
GCTACAATGGAATTACGTTGGACGACGATTTGAGCTTGGAAGCTGCTGGTTTAAACGACC
TTTCCACTGTTCAAGTTTTGGGACGCGTACTTGGAGGTAAAGTGCACGGTTCTTTGGCAC
GTGCTGGTAAAGTGAAGGGTCAAACACCAAAAGTTGAGGCCCAAGAAAAGAAGAAAAAGA
AGACTGGCCGAGCCAAACGTCGCATGCAATACAACAGGAGATTCGTGAATGTTGTTGCCA
CCTTTGGTCGTCGACGTGGACCAAACGCCAACTCCTAAACTGTTTGTCCAATTTCTGCTA
TCTCGTGTATGTTGAATCATATGTAAAGTAGCAGATAATAAATAAAAAAACGAAACCACC
TAATTATGTCTTTTATCCAAAACAAAAGCGATTCAGTTTACTATTGTCATGATATCTCTT
AAAAACTATTTTGTTACATAGAACTTCCACTGTAAGATTTCACTGCATGTTTAAACAGTC
ATTGTATAGTATCTCCATGTCTACTTATCTTCCTGTACAAAATCCCTGCACAATAATATA
TGCTTTTACCTAATAACTATATTCTCAAGAAGTAAACCGGTTATAGGGTTGTGTGTATTA
AAGAAAAACACAAAG

InterProScan

SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[13-93] 7.37E-17
SMART
Ubiquitin_dom (IPR000626) - T[19-88] 2.7E-12
ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[19-92] 17.234
Pfam
Ubiquitin_dom (IPR000626) - T[21-88] 1.1E-12
Pfam
Ribosomal_S30 (IPR006846) - T[93-150] 2.4E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS30_HUMAN 88.136 % 89.7 1.26E-24
UBIM_HUMAN 41.892 % 67.4 8.03E-16