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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R0.1...' > 
  2. Transcript 'KH2012:KH.C10.10.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.nonSL25-1

Possible name(s)

FAU; RPS27A; UBB

Gene model

KH2012:KH.C10.10

Location

KhC10 [827,281 / 828,068]

Sequences

Amino acid sequence

Length: 149

>KH.C10.10.v1.A.nonSL25-1
IGVYCKPCLKGFNSTNMQIFLKTNELHCVQVDSGDLVSNLKAQINAIEGIATEDQVLSYN
GITLDDDLSLEAAGLNDLSTVQVLGRVLGGKVHGSLARAGKVKGQTPKVEAQEKKKKKTG
RAKRRMQYNRRFVNVVATFGRRRGPNANS

Nucleotide sequence

Length: 787

>KH2012:KH.C10.10.v1.A.nonSL25-1
ATCGGTGTTTATTGTAAACCTTGTTTAAAAGGGTTTAATTCAACCAATATGCAGATATTT
TTGAAAACAAATGAGTTGCACTGCGTGCAGGTCGATAGTGGAGACCTCGTGTCTAACCTA
AAGGCCCAAATCAACGCGATTGAAGGTATCGCAACCGAAGACCAAGTATTAAGCTACAAT
GGAATTACGTTGGACGACGATTTGAGCTTGGAAGCTGCTGGTTTAAACGACCTTTCCACT
GTTCAAGTTTTGGGACGCGTACTTGGAGGTAAAGTGCACGGTTCTTTGGCACGTGCTGGT
AAAGTGAAGGGTCAAACACCAAAAGTTGAGGCCCAAGAAAAGAAGAAAAAGAAGACTGGC
CGAGCCAAACGTCGCATGCAATACAACAGGAGATTCGTGAATGTTGTTGCCACCTTTGGT
CGTCGACGTGGACCAAACGCCAACTCCTAAACTGTTTGTCCAATTTCTGCTATCTCGTGT
ATGTTGAATCATATGTAAAGTAGCAGATAATAAATAAAAAAACGAAACCACCTAATTATG
TCTTTTATCCAAAACAAAAGCGATTCAGTTTACTATTGTCATGATATCTCTTAAAAACTA
TTTTGTTACATAGAACTTCCACTGTAAGATTTCACTGCATGTTTAAACAGTCATTGTATA
GTATCTCCATGTCTACTTATCTTCCTGTACAAAATCCCTGCACAATAATATATGCTTTTA
CCTAATAACTATATTCTCAAGAAGTAAACCGGTTATAGGGTTGTGTGTATTAAAGAAAAA
CACAAAG

InterProScan

SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[12-91] 7.6E-17
ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[17-90] 17.234
SMART
Ubiquitin_dom (IPR000626) - T[17-86] 2.7E-12
Pfam
Ubiquitin_dom (IPR000626) - T[19-86] 1.0E-12
Pfam
Ribosomal_S30 (IPR006846) - T[91-148] 2.3E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS30_HUMAN 88.136 % 89.4 1.37E-24
UBIM_HUMAN 41.892 % 67.4 7.27E-16