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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R0.1...' > 
  2. Transcript 'KH2012:KH.C1.1027.v1...' > 
  3. Transcript 'Phfumi.CG.MTP2014.S1...' > 
  4. Transcript 'Phfumi.CG.MTP2014.S2...' > 
  5. Transcript 'KH2012:KH.C10.10.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.nonSL24-1

Possible name(s)

FAU; RPS27A; UBB

Gene model

KH2012:KH.C10.10

Location

KhC10 [827,281 / 828,061]

Sequences

Amino acid sequence

Length: 146

>KH.C10.10.v1.A.nonSL24-1
YCKPCLKGFNSTNMQIFLKTNELHCVQVDSGDLVSNLKAQINAIEGIATEDQVLSYNGIT
LDDDLSLEAAGLNDLSTVQVLGRVLGGKVHGSLARAGKVKGQTPKVEAQEKKKKKTGRAK
RRMQYNRRFVNVVATFGRRRGPNANS

Nucleotide sequence

Length: 780

>KH2012:KH.C10.10.v1.A.nonSL24-1
TTTATTGTAAACCTTGTTTAAAAGGGTTTAATTCAACCAATATGCAGATATTTTTGAAAA
CAAATGAGTTGCACTGCGTGCAGGTCGATAGTGGAGACCTCGTGTCTAACCTAAAGGCCC
AAATCAACGCGATTGAAGGTATCGCAACCGAAGACCAAGTATTAAGCTACAATGGAATTA
CGTTGGACGACGATTTGAGCTTGGAAGCTGCTGGTTTAAACGACCTTTCCACTGTTCAAG
TTTTGGGACGCGTACTTGGAGGTAAAGTGCACGGTTCTTTGGCACGTGCTGGTAAAGTGA
AGGGTCAAACACCAAAAGTTGAGGCCCAAGAAAAGAAGAAAAAGAAGACTGGCCGAGCCA
AACGTCGCATGCAATACAACAGGAGATTCGTGAATGTTGTTGCCACCTTTGGTCGTCGAC
GTGGACCAAACGCCAACTCCTAAACTGTTTGTCCAATTTCTGCTATCTCGTGTATGTTGA
ATCATATGTAAAGTAGCAGATAATAAATAAAAAAACGAAACCACCTAATTATGTCTTTTA
TCCAAAACAAAAGCGATTCAGTTTACTATTGTCATGATATCTCTTAAAAACTATTTTGTT
ACATAGAACTTCCACTGTAAGATTTCACTGCATGTTTAAACAGTCATTGTATAGTATCTC
CATGTCTACTTATCTTCCTGTACAAAATCCCTGCACAATAATATATGCTTTTACCTAATA
ACTATATTCTCAAGAAGTAAACCGGTTATAGGGTTGTGTGTATTAAAGAAAAACACAAAG

InterProScan

SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[9-88] 7.14E-17
ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[14-87] 17.234
SMART
Ubiquitin_dom (IPR000626) - T[14-83] 2.7E-12
Pfam
Ubiquitin_dom (IPR000626) - T[16-83] 9.8E-13
Pfam
Ribosomal_S30 (IPR006846) - T[88-145] 2.2E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS30_HUMAN 88.136 % 89.7 1.09E-24
UBIM_HUMAN 41.892 % 67.4 6.98E-16