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TRANSCRIPT CARD

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  1. Clone 'cien132209' > 
  2. Transcript 'KH2012:KH.C10.10.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.nonSL16-1

Possible name(s)

FAU; RPS27A; UBB

Gene model

KH2012:KH.C10.10

Location

KhC10 [827,281 / 828,042]

Sequences

Amino acid sequence

Length: 140

>KH.C10.10.v1.A.nonSL16-1
KGFNSTNMQIFLKTNELHCVQVDSGDLVSNLKAQINAIEGIATEDQVLSYNGITLDDDLS
LEAAGLNDLSTVQVLGRVLGGKVHGSLARAGKVKGQTPKVEAQEKKKKKTGRAKRRMQYN
RRFVNVVATFGRRRGPNANS

Nucleotide sequence

Length: 761

>KH2012:KH.C10.10.v1.A.nonSL16-1
AAAAGGGTTTAATTCAACCAATATGCAGATATTTTTGAAAACAAATGAGTTGCACTGCGT
GCAGGTCGATAGTGGAGACCTCGTGTCTAACCTAAAGGCCCAAATCAACGCGATTGAAGG
TATCGCAACCGAAGACCAAGTATTAAGCTACAATGGAATTACGTTGGACGACGATTTGAG
CTTGGAAGCTGCTGGTTTAAACGACCTTTCCACTGTTCAAGTTTTGGGACGCGTACTTGG
AGGTAAAGTGCACGGTTCTTTGGCACGTGCTGGTAAAGTGAAGGGTCAAACACCAAAAGT
TGAGGCCCAAGAAAAGAAGAAAAAGAAGACTGGCCGAGCCAAACGTCGCATGCAATACAA
CAGGAGATTCGTGAATGTTGTTGCCACCTTTGGTCGTCGACGTGGACCAAACGCCAACTC
CTAAACTGTTTGTCCAATTTCTGCTATCTCGTGTATGTTGAATCATATGTAAAGTAGCAG
ATAATAAATAAAAAAACGAAACCACCTAATTATGTCTTTTATCCAAAACAAAAGCGATTC
AGTTTACTATTGTCATGATATCTCTTAAAAACTATTTTGTTACATAGAACTTCCACTGTA
AGATTTCACTGCATGTTTAAACAGTCATTGTATAGTATCTCCATGTCTACTTATCTTCCT
GTACAAAATCCCTGCACAATAATATATGCTTTTACCTAATAACTATATTCTCAAGAAGTA
AACCGGTTATAGGGTTGTGTGTATTAAAGAAAAACACAAAG

InterProScan

SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[8-95] 7.14E-17
SMART
Ubiquitin_dom (IPR000626) - T[8-77] 2.7E-12
ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[8-81] 17.234
Pfam
Ubiquitin_dom (IPR000626) - T[10-77] 8.8E-13
Pfam
Ribosomal_S30 (IPR006846) - T[82-139] 2.0E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS30_HUMAN 88.136 % 89.7 7.26E-25
UBIM_HUMAN 41.892 % 67.8 5.16E-16