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TRANSCRIPT CARD

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  1. Clone 'cien222076' > 
  2. Transcript 'KH2012:KH.C10.10.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.nonSL14-1

Possible name(s)

FAU; RPS27A; UBB

Gene model

KH2012:KH.C10.10

Location

KhC10 [827,281 / 828,010]

Sequences

Amino acid sequence

Length: 129

>KH.C10.10.v1.A.nonSL14-1
LKTNELHCVQVDSGDLVSNLKAQINAIEGIATEDQVLSYNGITLDDDLSLEAAGLNDLST
VQVLGRVLGGKVHGSLARAGKVKGQTPKVEAQEKKKKKTGRAKRRMQYNRRFVNVVATFG
RRRGPNANS

Nucleotide sequence

Length: 729

>KH2012:KH.C10.10.v1.A.nonSL14-1
TTTTGAAAACAAATGAGTTGCACTGCGTGCAGGTCGATAGTGGAGACCTCGTGTCTAACC
TAAAGGCCCAAATCAACGCGATTGAAGGTATCGCAACCGAAGACCAAGTATTAAGCTACA
ATGGAATTACGTTGGACGACGATTTGAGCTTGGAAGCTGCTGGTTTAAACGACCTTTCCA
CTGTTCAAGTTTTGGGACGCGTACTTGGAGGTAAAGTGCACGGTTCTTTGGCACGTGCTG
GTAAAGTGAAGGGTCAAACACCAAAAGTTGAGGCCCAAGAAAAGAAGAAAAAGAAGACTG
GCCGAGCCAAACGTCGCATGCAATACAACAGGAGATTCGTGAATGTTGTTGCCACCTTTG
GTCGTCGACGTGGACCAAACGCCAACTCCTAAACTGTTTGTCCAATTTCTGCTATCTCGT
GTATGTTGAATCATATGTAAAGTAGCAGATAATAAATAAAAAAACGAAACCACCTAATTA
TGTCTTTTATCCAAAACAAAAGCGATTCAGTTTACTATTGTCATGATATCTCTTAAAAAC
TATTTTGTTACATAGAACTTCCACTGTAAGATTTCACTGCATGTTTAAACAGTCATTGTA
TAGTATCTCCATGTCTACTTATCTTCCTGTACAAAATCCCTGCACAATAATATATGCTTT
TACCTAATAACTATATTCTCAAGAAGTAAACCGGTTATAGGGTTGTGTGTATTAAAGAAA
AACACAAAG

InterProScan

SMART
Ubiquitin_dom (IPR000626) - T[1-66] 1.6E-6
ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[1-70] 15.601
SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[3-84] 2.21E-15
Pfam
Ubiquitin_dom (IPR000626) - T[5-66] 3.0E-12
Pfam
Ribosomal_S30 (IPR006846) - T[71-128] 1.7E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS30_HUMAN 88.136 % 90.1 3.61E-25