Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.nonSL11-1

Possible name(s)

FAU; RPS27A; UBB

Gene model

KH2012:KH.C10.10

Location

KhC10 [827,281 / 828,000]

Sequences

Amino acid sequence

Length: 126

>KH.C10.10.v1.A.nonSL11-1
NELHCVQVDSGDLVSNLKAQINAIEGIATEDQVLSYNGITLDDDLSLEAAGLNDLSTVQV
LGRVLGGKVHGSLARAGKVKGQTPKVEAQEKKKKKTGRAKRRMQYNRRFVNVVATFGRRR
GPNANS

Nucleotide sequence

Length: 719

>KH2012:KH.C10.10.v1.A.nonSL11-1
AAATGAGTTGCACTGCGTGCAGGTCGATAGTGGAGACCTCGTGTCTAACCTAAAGGCCCA
AATCAACGCGATTGAAGGTATCGCAACCGAAGACCAAGTATTAAGCTACAATGGAATTAC
GTTGGACGACGATTTGAGCTTGGAAGCTGCTGGTTTAAACGACCTTTCCACTGTTCAAGT
TTTGGGACGCGTACTTGGAGGTAAAGTGCACGGTTCTTTGGCACGTGCTGGTAAAGTGAA
GGGTCAAACACCAAAAGTTGAGGCCCAAGAAAAGAAGAAAAAGAAGACTGGCCGAGCCAA
ACGTCGCATGCAATACAACAGGAGATTCGTGAATGTTGTTGCCACCTTTGGTCGTCGACG
TGGACCAAACGCCAACTCCTAAACTGTTTGTCCAATTTCTGCTATCTCGTGTATGTTGAA
TCATATGTAAAGTAGCAGATAATAAATAAAAAAACGAAACCACCTAATTATGTCTTTTAT
CCAAAACAAAAGCGATTCAGTTTACTATTGTCATGATATCTCTTAAAAACTATTTTGTTA
CATAGAACTTCCACTGTAAGATTTCACTGCATGTTTAAACAGTCATTGTATAGTATCTCC
ATGTCTACTTATCTTCCTGTACAAAATCCCTGCACAATAATATATGCTTTTACCTAATAA
CTATATTCTCAAGAAGTAAACCGGTTATAGGGTTGTGTGTATTAAAGAAAAACACAAAG

InterProScan

ProSiteProfiles	Ubiquitin_dom (IPR000626) - T[1-67] 15.296
SMART	Ubiquitin_dom (IPR000626) - T[1-63] 2.1E-5
SUPERFAMILY	Ubiquitin-like_domsf (IPR029071) - T[2-81] 4.6E-15
Pfam	Ubiquitin_dom (IPR000626) - T[4-63] 5.2E-12
Pfam	Ribosomal_S30 (IPR006846) - T[68-125] 1.6E-29

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS30_HUMAN	88.136 %	90.1	3.62E-25