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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C10.10.v1....'
  2. Clone 'csef005i21'
  3. Transcript 'KH2012:KH.C10.10.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.nonSL10-1

Possible name(s)

FAU; RPS27A; UBB

Location

KhC10 [827,281 / 828,046]

Sequences

Amino acid sequence

Length: 141

>KH.C10.10.v1.A.nonSL10-1
LKGFNSTNMQIFLKTNELHCVQVDSGDLVSNLKAQINAIEGIATEDQVLSYNGITLDDDL
SLEAAGLNDLSTVQVLGRVLGGKVHGSLARAGKVKGQTPKVEAQEKKKKKTGRAKRRMQY
NRRFVNVVATFGRRRGPNANS

Nucleotide sequence

Length: 765

>KH2012:KH.C10.10.v1.A.nonSL10-1
GTTTAAAAGGGTTTAATTCAACCAATATGCAGATATTTTTGAAAACAAATGAGTTGCACT
GCGTGCAGGTCGATAGTGGAGACCTCGTGTCTAACCTAAAGGCCCAAATCAACGCGATTG
AAGGTATCGCAACCGAAGACCAAGTATTAAGCTACAATGGAATTACGTTGGACGACGATT
TGAGCTTGGAAGCTGCTGGTTTAAACGACCTTTCCACTGTTCAAGTTTTGGGACGCGTAC
TTGGAGGTAAAGTGCACGGTTCTTTGGCACGTGCTGGTAAAGTGAAGGGTCAAACACCAA
AAGTTGAGGCCCAAGAAAAGAAGAAAAAGAAGACTGGCCGAGCCAAACGTCGCATGCAAT
ACAACAGGAGATTCGTGAATGTTGTTGCCACCTTTGGTCGTCGACGTGGACCAAACGCCA
ACTCCTAAACTGTTTGTCCAATTTCTGCTATCTCGTGTATGTTGAATCATATGTAAAGTA
GCAGATAATAAATAAAAAAACGAAACCACCTAATTATGTCTTTTATCCAAAACAAAAGCG
ATTCAGTTTACTATTGTCATGATATCTCTTAAAAACTATTTTGTTACATAGAACTTCCAC
TGTAAGATTTCACTGCATGTTTAAACAGTCATTGTATAGTATCTCCATGTCTACTTATCT
TCCTGTACAAAATCCCTGCACAATAATATATGCTTTTACCTAATAACTATATTCTCAAGA
AGTAAACCGGTTATAGGGTTGTGTGTATTAAAGAAAAACACAAAG

InterProScan

ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[9-82] 17.234
SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[9-96] 7.37E-17
SMART
Ubiquitin_dom (IPR000626) - T[9-78] 2.7E-12
Pfam
Ubiquitin_dom (IPR000626) - T[11-78] 9.0E-13
Pfam
Ribosomal_S30 (IPR006846) - T[83-140] 2.1E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS30_HUMAN 88.136 % 89.7 6.8E-25
UBIM_HUMAN 41.892 % 67.8 5.14E-16