- Transcript 'Boleac.CG.SB_v3.S983...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S983.g15764.01.t
Possible name(s)
FCN2; FCN3; TNXB
Gene model
Location
S983 [543 / 17,660]
Amino acid sequence
Length: 1,107
>Boleac.CG.SB_v3.S983.g15764.01.p
MDRCGLRYGKFDKCTPAPMLQSRLISATPVCLAGEDANPETLDDLLRRYCRNNPTDEYWR
MTSSIFINGQYGDRGSRGETGEPGFPGPIGPIGLKNDTLIREKFLENLETVFRHMNWSAF
LGVKLQSCQDVIDKLSFLPYVKSGVFSIYRPNQGWTDVYCDLTGEQEDWTVFQRRMDGSV
EFYRGWDDYVNGFGDKHGEFWLGLEEMHRLTRSGQHELRIDMISENGTYVRANYRHFKIG
PASDKYRLHVGGYSGNATDALANPPNVQAIHNGRQFSTYDNDGGNCAQSWKGAWWYKFCY
YSNLNGLYHDKNYQGVVWRTTEGQRMNMRFTEMRLRRVFQRRMDGTVDFYRGWEEYVNGF
GKQRNGEFWLEAYVYCREREKEKGCNAGLQRKAQLAGLEKLHQMTADGHYELKIDMVERN
GTRLYAKYNNFRVGPSSDNYRLTVEGYSGNASDSFGNTQSPRHSQNGQQFSTKDADHDQS
VLNCARDWSSGWWHNSCMNSNLNGLYHFVVGAQGVSWRDQNAREYIMKYMATPVFDTSIM
EDKSASHLGKFNVKFTHCVTVFRTVRWASTYRVTLESCQDVKTKLLHLIDVRSGVYEIYL
PKLGWTNVYCDLDVDAGGWTVFQRRMDGSVDFFRGWEDYEKGFGNRNGEFWLVSSAWDQA
LITTGFTFTGILETRLTRWRNLSIRMLSTTIRNSPQKMLTTIQITVVSIKLDAHKPTCNR
HKGRCCDAVQRRMHTSALHNCAESYKGAWWYDRCHHSNLNGEFNEVSYTALSNAENLESG
FRNLYCQQCALWCSGDMNEASLRGPAGPAGPRGRRGLAGSKGDKGDPGQPATVNMTALEE
LIERKIEEGRCAAILLLGVLANRKSRALNKRQGPTAMPPPQSSCRDVNTAAAKTLNDTGG
VFDIVIPEVGTKEVYCNTDVDGGDWIVFQRRMDGSVDFYRVWSEYVSGFGNARGEYWLGL
EALHQLTKGNDQELRVDMIAWNGTYLYAKYRYFSVGPASDNYRLRVRGYSGNATDSLYYG
DKDRLDPKYSHDSKQFSTKDNDNDDASGSNCATYYTGAWWYASCFSSSLNGIYARRHDSN
GVVWYDQNGRSARVNMKFVEMKMRRKS
Nucleotide sequence
Length: 3,324
>Boleac.CG.SB_v3.S983.g15764.01.t
ATGGACAGATGTGGGCTCCGTTATGGAAAGTTTGACAAGTGCACGCCTGCTCCAATGTTA
CAATCACGCTTGATATCAGCCACGCCAGTCTGTCTAGCTGGTGAGGATGCTAACCCAGAG
ACACTGGATGACCTTCTACGTCGATATTGTCGTAACAATCCTACTGATGAATATTGGCGT
ATGACCAGTTCGATTTTCATAAACGGTCAGTATGGCGATAGAGGATCTCGTGGAGAAACT
GGCGAGCCGGGTTTCCCGGGTCCAATCGGACCTATTGGCTTGAAGAATGACACTTTGATA
AGGGAGAAGTTTTTAGAGAATTTAGAAACAGTGTTTCGTCACATGAATTGGTCTGCCTTT
CTCGGAGTGAAGCTTCAAAGTTGCCAAGACGTGATCGACAAGCTTTCGTTTCTGCCGTAC
GTGAAGAGTGGAGTTTTCAGTATTTATCGACCGAACCAAGGATGGACGGATGTCTACTGT
GATTTGACCGGGGAACAGGAAGACTGGACGGTGTTCCAACGTCGCATGGACGGCAGCGTT
GAATTCTACAGAGGCTGGGACGACTACGTGAACGGATTCGGAGACAAACACGGAGAGTTC
TGGCTCGGTCTGGAAGAAATGCATCGACTCACTCGATCAGGACAACATGAGCTGAGGATT
GACATGATATCGGAAAACGGGACTTACGTGAGAGCAAATTACAGACACTTCAAAATTGGA
CCAGCATCCGACAAGTACCGTCTACACGTTGGTGGCTACTCTGGCAATGCAACAGACGCC
TTAGCCAACCCTCCGAACGTACAGGCAATCCACAACGGTCGGCAATTCAGCACATACGAC
AACGACGGTGGTAATTGTGCACAGTCATGGAAAGGAGCGTGGTGGTATAAGTTCTGTTAT
TACAGCAATCTGAATGGGTTGTACCATGACAAAAACTATCAAGGAGTCGTCTGGAGAACG
ACCGAAGGCCAGCGAATGAACATGCGCTTTACCGAGATGAGGCTCCGTCGAGTTTTCCAA
CGTAGAATGGACGGTACCGTTGATTTCTACCGAGGGTGGGAGGAATACGTCAATGGATTC
GGAAAGCAACGCAATGGCGAATTCTGGTTAGAGGCGTATGTATACTGTAGAGAGAGAGAA
AAAGAGAAAGGTTGCAACGCAGGTCTGCAACGAAAGGCGCAATTGGCGGGTCTTGAAAAG
CTTCATCAAATGACTGCAGACGGACATTATGAATTGAAAATCGACATGGTTGAACGCAAC
GGAACAAGGCTTTATGCTAAATACAATAACTTCCGAGTGGGTCCGTCATCAGACAATTAC
CGCCTCACCGTGGAAGGATACTCGGGCAACGCATCCGACTCCTTCGGAAATACCCAAAGC
CCCCGACACAGTCAAAACGGCCAACAATTTTCCACAAAGGACGCTGACCATGACCAATCA
GTCCTGAATTGTGCCAGAGACTGGAGCAGTGGATGGTGGCATAATAGTTGCATGAATAGC
AACCTAAACGGGCTGTATCACTTCGTTGTTGGAGCTCAAGGTGTCAGTTGGAGGGATCAA
AACGCGAGAGAATACATAATGAAATACATGGCTACGCCTGTCTTTGACACGTCCATAATG
GAGGATAAATCTGCTTCACATCTTGGTAAATTCAACGTTAAATTTACTCACTGCGTTACA
GTATTCCGCACCGTGAGATGGGCCTCAACATATCGAGTGACGCTGGAGAGTTGTCAAGAT
GTCAAGACAAAATTATTGCATTTGATTGACGTGCGAAGCGGCGTGTATGAGATTTATCTC
CCTAAGTTGGGATGGACGAATGTCTACTGCGACTTGGATGTTGACGCAGGAGGATGGACG
GTTTTTCAAAGAAGAATGGACGGAAGTGTTGATTTTTTCCGTGGATGGGAGGACTACGAG
AAAGGATTTGGTAACAGAAATGGAGAATTTTGGCTCGTGAGTTCCGCCTGGGACCAGGCA
CTGATCACTACCGGCTTCACGTTTACGGGTATACTGGAAACGCGACTGACTCGTTGGAGA
AACCTCTCCATTCGCATGCTATCCACAACCATAAGGAATTCTCCACAAAAGATGCTGACC
ACGATCCAGATTACAGTGGTAAGCATAAAGCTTGATGCACACAAACCCACTTGCAACCGC
CACAAGGGGCGTTGCTGCGACGCTGTGCAGCGTCGCATGCACACAAGCGCTTTACACAAC
TGCGCCGAAAGCTACAAAGGAGCTTGGTGGTACGACCGCTGCCACCACAGCAACTTGAAC
GGCGAGTTCAACGAAGTCTCGTACACGGCATTGTCTAATGCTGAAAACTTGGAAAGTGGG
TTCCGCAACCTCTACTGTCAACAATGCGCTTTATGGTGTTCCGGAGATATGAACGAAGCC
TCCTTACGTGGCCCGGCAGGACCAGCTGGGCCTAGGGGAAGGCGCGGATTAGCGGGCTCA
AAAGGTGATAAAGGGGACCCTGGTCAACCTGCCACGGTCAACATGACGGCATTGGAGGAG
CTAATCGAGAGAAAGATTGAGGAAGGTAGGTGTGCAGCTATTTTGCTGTTGGGTGTTCTG
GCAAATCGGAAAAGCAGAGCTCTCAATAAGCGGCAAGGACCCACGGCAATGCCGCCTCCT
CAGTCAAGTTGTCGTGACGTCAACACGGCCGCAGCGAAGACACTGAACGACACTGGAGGT
GTATTCGACATTGTTATTCCAGAAGTAGGGACGAAAGAAGTGTATTGTAACACGGACGTG
GATGGCGGAGACTGGATTGTTTTTCAACGTAGAATGGATGGAAGCGTCGATTTTTACCGG
GTTTGGTCCGAGTATGTATCCGGATTCGGAAATGCGAGAGGAGAATATTGGCTCGGACTA
GAAGCTCTCCACCAATTGACCAAAGGCAACGACCAAGAACTGCGGGTAGACATGATCGCC
TGGAACGGAACGTACCTATACGCGAAATACAGATATTTTTCGGTTGGACCTGCGTCAGAC
AACTACCGTCTACGGGTGAGAGGGTACTCTGGCAATGCAACCGACAGCTTATATTACGGT
GATAAAGATCGACTGGACCCGAAATACAGCCATGATAGTAAACAATTCTCCACAAAAGAC
AACGACAACGATGACGCAAGCGGTTCGAACTGCGCCACCTACTACACAGGTGCGTGGTGG
TACGCCAGCTGCTTCTCCAGCAGTCTGAACGGGATCTACGCTAGGCGTCATGACTCCAAC
GGAGTGGTATGGTACGATCAAAACGGGCGCAGCGCACGGGTTAATATGAAATTCGTGGAA
ATGAAAATGCGCCGGAAGAGCTAA
| SUPERFAMILY |
Fibrinogen-like_C (IPR036056) - T[119-337] 1.7E-69 - T[338-370] 1.96E-49 - T[397-531] 1.96E-49 - T[573-652] 6.58E-26 - T[617-770] 6.15E-22 - T[877-1105] 3.27E-70 |
| ProSiteProfiles |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[119-339] 48.17 - T[340-538] 28.123 - T[569-761] 27.392 - T[875-1107] 50.651 |
| SMART |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[123-338] 4.4E-73 - T[339-537] 7.2E-30 - T[573-784] 1.9E-12 - T[879-1106] 5.1E-80 |
| CDD |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[126-338] 1.32629E-79 - T[338-530] 1.68128E-60 - T[879-1106] 1.37606E-76 |
| Pfam |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[142-336] 1.5E-58 - T[338-530] 2.5E-38 - T[590-768] 3.8E-32 - T[910-1104] 1.6E-58 |
| ProSitePatterns |
Fibrinogen_CS (IPR020837) - T[294-306] . - T[749-761] . - T[1059-1071] . |
| Gene3D |
Fibrinogen_a/b/g_C_1 (IPR014716) - T[335-466] 2.2E-32 - T[571-665] 7.6E-27 |
| Gene3D |
Fibrinogen_a/b/g_C_2 (IPR014715) - T[467-528] 2.9E-16 - T[728-782] 4.3E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FCN1_HUMAN | 38.768 % | 184 | 1.34E-51 |
| FCN2_HUMAN | 43.902 % | 160 | 2.19E-43 |
| FCN3_HUMAN | 41.15 % | 152 | 8.93E-41 |