- Transcript 'Boleac.CG.SB_v3.S96....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S96.g15597.01.t
Possible name(s)
DEPDC1; DEPDC1B; DEPDC7
Gene model
Location
S96 [143,154 / 149,025]
Amino acid sequence
Length: 662
>Boleac.CG.SB_v3.S96.g15597.01.p
MVFKNCPGAEVTSPNSTKIAPGPYRATKLWNGIVRKFRDEMQCKKHRRHFKAYNQCFTAS
DATDFLHEILKRNPNLGKDVTRQQTIHLLRKFLQNHVIEDVQGRWGSENFEDDGKLYRFS
PIDDCEEQIRQPLATINENTINNETASIENQKKDKKKLKGQGKPKCNNEANIRNSSEMSS
TWEHLKRPLPPISSIPKCRVISPKITETDVQEIWKRTVLEKLRGALQMESLCDVITDDKI
SGCDIRHNATRVGKSGVVQVEKEQDIPYWALSAMTCIANWPNSTEAGLPCYPGFEKDVFK
AVCDYFYGLEPVTIHNYGTAKKKTTXSAPVTTTHKPEPLLTYDHYELFTNAICLIQPGSE
KEAITALRYTLLLLPPVNRRKLHLLIRLLSKMCGNTHLTKLGSQDDIRSLVLTTFSNTVM
SCNEEVYLDELLATRLVSFLIDHHCEIFKVPEDLESVVEDKLAEMRRPEVRYDEACEEIP
HMQHVLATAHGAKVRLRQKSRINRGDRNKRKSADLMKSWDKIVTTFKSRPVSHAPSSNNE
RPTRPEQDTYLRMRLRSRRYREGLERYKSADNDQPEQRQRTHTIGDRGDISTQFTESTRY
LNADSPTPSDDGPGIKPAKSCSDICDIKPQSSLGNNKSSEMGSHWNLKMFGKPFSRLRKV
RS
Nucleotide sequence
Length: 2,415
>Boleac.CG.SB_v3.S96.g15597.01.t
ATGGTGTTCAAGAATTGTCCTGGTGCTGAGGTCACTAGCCCGAATTCAACAAAGATAGCA
CCCGGACCGTACAGAGCAACGAAATTATGGAATGGGATTGTACGAAAATTTCGTGACGAA
ATGCAATGCAAGAAACACCGTCGACATTTTAAAGCATACAACCAATGCTTTACGGCGTCA
GACGCAACTGATTTTCTGCACGAAATATTAAAACGAAATCCAAATTTGGGAAAGGATGTC
ACGAGACAACAGACAATCCATTTGCTACGTAAATTTCTCCAAAATCACGTGATTGAGGAC
GTACAAGGACGATGGGGAAGTGAAAATTTTGAAGACGACGGGAAACTCTACAGATTCTCT
CCTATCGACGACTGCGAAGAGCAAATCAGACAGCCACTCGCCACCATAAATGAAAACACA
ATCAATAATGAAACAGCTTCAATAGAAAACCAGAAGAAAGATAAAAAGAAATTGAAAGGA
CAAGGCAAGCCAAAATGCAACAACGAAGCAAATATCCGTAATTCATCGGAAATGTCATCA
ACCTGGGAGCATTTGAAGCGGCCATTACCACCTATTTCTTCGATACCGAAATGTAGGGTG
ATTTCCCCCAAAATAACAGAAACAGACGTTCAAGAGATCTGGAAAAGGACCGTACTTGAG
AAATTACGGGGAGCGCTGCAAATGGAGTCACTTTGTGACGTCATAACCGACGATAAAATC
AGCGGTTGTGACATTAGACACAACGCGACTCGTGTCGGCAAGTCTGGCGTGGTTCAAGTT
GAAAAAGAACAAGACATTCCATACTGGGCTTTGAGCGCAATGACATGTATAGCCAACTGG
CCTAATAGCACAGAAGCAGGTTTACCATGCTATCCAGGATTTGAGAAAGACGTTTTCAAA
GCCGTCTGCGATTATTTCTACGGTCTCGAGCCAGTTACCATCCACAATTACGGTACTGCT
AAGAAGAAAACGACACNAAGCGCGCCAGTTACAACAACACACAAACCAGAACCATTACTG
ACGTACGACCATTACGAACTATTTACAAACGCGATTTGTTTAATACAACCCGGATCGGAG
AAAGAGGCCATCACAGCGTTGCGATATACCTTGTTACTGCTCCCACCCGTCAACAGACGA
AAACTACATTTGCTTATCCGTCTCTTGTCTAAGATGTGCGGCAACACACATCTTACAAAG
TTAGGAAGTCAGGACGATATAAGGTCTTTGGTGCTTACGACGTTCTCCAATACTGTCATG
TCGTGCAATGAGGAGGTTTACCTTGACGAGCTTTTAGCAACGAGGCTGGTTTCGTTTTTA
ATTGACCACCATTGTGAGATTTTTAAAGTGCCGGAAGATTTAGAATCCGTTGTGGAAGAC
AAACTGGCAGAAATGCGAAGACCCGAAGTCAGATACGACGAAGCGTGTGAAGAAATCCCG
CATATGCAACACGTATTGGCAACAGCGCACGGTGCGAAAGTGCGGTTGCGTCAGAAGTCT
CGAATCAATCGTGGCGATAGAAATAAAAGGAAATCCGCCGATCTCATGAAATCTTGGGAC
AAAATTGTCACCACGTTCAAAAGCAGACCGGTCAGTCACGCTCCGAGCTCAAATAATGAA
AGACCAACGCGTCCAGAACAGGACACGTACTTACGAATGAGACTCCGATCACGAAGATAC
CGAGAAGGTCTCGAAAGATATAAAAGCGCTGATAATGATCAACCCGAGCAAAGGCAACGA
ACGCATACGATAGGCGACCGCGGCGACATTTCTACACAGTTCACGGAGAGCACACGATAC
CTCAACGCAGACTCACCGACTCCTTCCGACGATGGACCCGGCATTAAACCAGCTAAATCA
TGTTCGGACATTTGTGATATAAAACCACAATCTAGTCTTGGGAATAATAAGTCTTCTGAA
ATGGGTTCACATTGGAATTTGAAAATGTTTGGAAAACCATTTAGTCGTTTACGAAAAGTT
CGATCATGAAATTCGCTATTNGATGATTTTTTATCTGAAATCAAGGTAGCTAACTTGGAC
AACCGGTTCAATATTCGCAATCATAAGTTCATGCCTATGCAATTCTGATCGTCTCTTCGT
ATTCAACGAAGGAGCAACCACTATTTAAAATTTGACAATGCAATGTGCTTGTCCGTCGTG
ATTCGCTAATCAATAAAAACATTGCTGCAAATGCTGTTTTGTTCATTTACATTCTTGAAG
TTTAGAGGATAAATGGTACAGTGATGAAAATCTTGTGGCCTGACCTTTGCCCAGGCTCCA
AGATTATCTGGACTATGACCGACGTAAGAGGAGCGAGCCGTGATTATTCTTAGCAAAGCT
TAGAACAGATTACAGACAGATTACAAACCTCATCGTAGAATTATATTCAGCTTTCATGCC
CCCACACTGGCTTCC
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[19-120] 1.1E-33 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[26-121] 1.36E-17 |
| SMART |
DEP_dom (IPR000591) - T[37-121] 5.9E-17 |
| Pfam |
DEP_dom (IPR000591) - T[41-119] 9.6E-17 |
| ProSiteProfiles |
RhoGAP_dom (IPR000198) - T[258-448] 11.092 |
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[334-461] 7.6E-16 |
| Pfam |
RhoGAP_dom (IPR000198) - T[336-402] 2.5E-6 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[336-452] 3.14E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DEP1B_HUMAN | 39.434 % | 332 | 3.05E-106 |
| DEP1A_HUMAN | 39.017 % | 241 | 2.65E-69 |
