- Transcript 'Cisavi.CG.ENS81.R7.2...' >
- Transcript 'KH2012:KH.C12.325.v1...' >
- Transcript 'KH2012:KH.L65.8.v1.A...' >
- Transcript 'KH2012:KH.S423.2.v3....' >
- Transcript 'Boleac.CG.SB_v3.S944...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S944.g15482.01.t
Possible name(s)
FIBCD1; MFAP4; TNC
Gene model
Location
S944 [24,693 / 33,219]
Amino acid sequence
Length: 569
>Boleac.CG.SB_v3.S944.g15482.01.p
MSHTNGTHARLNYEGKEGPMGPPGPQGPPGAAANVDYRRINNMIRRGNSPQDRKISMLEE
KVIRLEEALRKFSTKGCRGLNSSNAKIVNETGGVFDIYPGDGSRAVEVYCDTVVDGGGWI
VFQRRMDGSENFHRNFIDYEMGFGRRQGEFWLGLANLHLLTKNGAELRVDLTDWDGNTAY
AKYSTFIVGDASTQYTLTVGGYSGTAGDSFANQNGQKFHTKDRDKNSCSANYKGGMWYNN
CHYVNLNGIYIDGGSYSGAYGVEWYHWKGLYPNVLAEQLDRYCEWKMSINRTHAHLNYRG
KAGPRGPPGPQGPPGTAANVDYERLNNMIRRGNSQQDSKILMLEEKVAHLEEALRKFTTK
NCRGLNSSNAKIVNETGGVFDIYPGDGSRAVEVYCDTVVDGGGWIVFQRRLDGSEDFQRS
FVDYETGFGRRQGEFWLGLRNLHLLTKNGAEFRVDLTDWDGNTAYAKYSNFIVGDASTQY
TLTVGGYSGTAGDSFTYHSGQKFHTKDRDKNSCSAQFKGGMWYNGCHYVNLNGIYMNSGS
YSGAHGVEWYHWKGRHGVSLKFAEMKLRI
Nucleotide sequence
Length: 3,057
>Boleac.CG.SB_v3.S944.g15482.01.t
ATGAGTCATACCAACGGGACGCATGCACGTCTAAACTACGAGGGTAAAGAGGGCCCGATG
GGTCCTCCAGGTCCTCAAGGACCGCCTGGGGCGGCCGCAAATGTTGACTATAGAAGGATC
AACAACATGATACGTAGAGGAAATTCTCCACAAGATAGGAAAATTTCGATGCTCGAGGAG
AAAGTTATTCGTCTTGAAGAAGCTCTTCGCAAATTTTCTACCAAAGGATGCCGGGGCTTA
AATTCATCGAACGCTAAGATCGTCAACGAGACTGGAGGAGTATTCGACATATATCCAGGA
GATGGATCTCGCGCTGTCGAAGTATATTGTGATACTGTGGTAGACGGTGGCGGCTGGATC
GTATTTCAAAGACGAATGGACGGGTCGGAGAATTTTCACCGGAACTTCATCGACTACGAA
ATGGGATTTGGCCGACGACAAGGAGAATTTTGGCTTGGATTAGCAAATTTACACCTATTG
ACAAAGAATGGAGCAGAGCTCAGAGTCGACTTAACGGACTGGGATGGGAACACTGCATAC
GCTAAATACTCAACCTTTATTGTCGGCGATGCCTCGACCCAGTACACGCTGACTGTTGGA
GGTTACTCCGGTACAGCTGGGGACTCATTTGCTAATCAAAATGGACAAAAATTCCACACG
AAAGATCGCGACAAAAATAGCTGCTCTGCGAACTACAAAGGCGGAATGTGGTACAATAAC
TGCCACTACGTCAACTTGAACGGAATTTACATTGACGGCGGCTCATATAGTGGCGCTTAT
GGCGTGGAGTGGTATCATTGGAAAGGGCTTTACCCGAATGTACTGGCGGAACAGTTGGAT
CGATACTGCGAGTGGAAAATGAGTATCAACAGGACCCATGCGCATCTGAACTACAGGGGT
AAAGCGGGCCCCAGAGGTCCTCCAGGTCCTCAAGGACCGCCTGGGACGGCCGCAAATGTT
GACTATGAAAGACTCAACAACATGATACGTAGAGGAAATTCTCAACAAGATAGCAAAATT
TTGATGCTGGAGGAAAAAGTTGCTCATCTAGAAGAAGCTCTCCGCAAATTTACCACCAAA
AACTGCCGGGGCTTGAATTCATCAAACGCTAAGATCGTCAACGAGACTGGAGGAGTATTC
GACATATATCCAGGAGATGGATCTCGTGCTGTCGAAGTTTATTGTGATACTGTGGTAGAC
GGTGGCGGCTGGATCGTATTTCAAAGACGACTGGACGGGTCGGAGGATTTTCAACGGAGC
TTCGTCGACTACGAAACGGGATTTGGCCGACGACAAGGAGAATTTTGGCTTGGATTAAGA
AATCTTCACCTCTTGACAAAGAATGGAGCAGAGTTTAGAGTGGACCTCACGGACTGGGAT
GGGAACACTGCATATGCTAAATACTCAAACTTCATTGTCGGCGATGCCTCGACCCAGTAC
ACTCTGACAGTGGGAGGTTACTCCGGTACGGCTGGGGATTCATTTACTTATCACAGTGGC
CAAAAATTTCACACGAAAGATCGCGACAAAAATAGCTGCTCTGCGCAGTTTAAAGGCGGA
ATGTGGTACAATGGCTGCCATTACGTCAACTTGAACGGAATTTACATGAACAGCGGCTCA
TATAGTGGCGCTCATGGCGTGGAGTGGTATCATTGGAAAGGACGCCATGGAGTTTCACTG
AAATTTGCTGAAATGAAACTAAGGATATAACATTTTTGACGCAATCCATATGCTATATCA
GAGTCTGTTTGTTTGTCGTCTATCAGTCTGTACAGAGGCCCTGGACTCCAGAGCCACGTT
TTATGCCGTGTGCTATATATGTTCTATTCTTGACGTTTCGGCCACGAAATTTGGTACGCG
TGTAAAGTTGGGTGTAATGGGTGCAATAAGGCACTTTTCCGCGTCACTCGCCTCGTAATG
GGAACTGGTGGGCGTCGCTGTTTCTGAATTGCCACACCTCCCACGATTGCATATCTGGTG
TGTCTCACCGAAAACTGCAAAACGCGAGATTCCAAACCCCTAAAAACGTAAACGTCATCC
GCTGGTCAAGGTGAACACTATATCGTTCGTCCTTACGAGGCTTTCAATTACCATGGCACG
GTTCGGTAGCGTCATACGCATTTCCCAGCCTAAAAAGCACTGATGTTTCATAACCTCATT
TGCTTTCACAGCATAATGTATTTGTGAAATTTCTCACGCATTCTGTTATCACAAAGAATA
GTCCACGTGAGTTAAACCACATCCCTTCCTATGTTGTAAGGTCACCAAAGTTTGGAGCCG
TGACATCATTGTCACGAACGCTGCATACGATGATTAAAACGAGAGGCTGCAATACGTGTC
AGCGGATATCATTGTGAGTTGCCGATATCGACGTGACGTGACACCCGTAACAAGTCATGT
TTGATTGTAATCACTTTTTACACCGGAAGTTTCGTCATAGCCTTGCTCTTTGCAATTGGC
CAAATAAAGGGGCAGGAAGTGCCCTTTCGAATTTGTGCGACCGATAACTTTTCACGTGAT
TATCATGGATAGATGTATATATACTTCTGTATGTTAAACGATAAATATAAATCCCTANTT
CGCAAAAAAAAGAATGAAAGTTTTCGCGCCTGAATGCAACTGAATGTCGAATACTGACGC
GTTCAGAACCCACCACAGCGTTGATTATGTCACCACAACGAATGATGGCGTCACAAATCA
GAGGAATCGTAAATGCCCTATATGAAGTAGGTTTAGGCCTATCCTTTTCTGGATTTTTGC
TCCTCATCAGTTTTGCTACGCTGCATAAAAGCTTGTGGGTAGCCTACCAGAATCACAAGA
TGCGGTCTACCATAATTTTTCGGCCAGCCAGCTTTTCGAGTCCCCTATGACGTTTAGCTG
CGACATTTTGTTATAATACTGTAGAAGTGTATAGCTGTAGTTATACAGTAGATGCTACGA
AATTTCCATAAATCTATACTGATGCTAAAGGCATTGAGAACCATTCCCTAATCGTCATTG
AGGAAAAAAGCTTTAGCGACATGACTATTTCCAATGAATCAAGGCAATAAATGTAAT
| ProSiteProfiles |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[68-269] 49.45 - T[353-569] 52.981 |
| SMART |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[80-273] 5.7E-75 - T[365-569] 6.0E-82 |
| SUPERFAMILY |
Fibrinogen-like_C (IPR036056) - T[89-271] 1.7E-64 - T[373-568] 2.75E-67 |
| Pfam |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[89-270] 1.0E-57 - T[373-568] 2.0E-60 |
| CDD |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[91-269] 7.27416E-83 - T[360-568] 1.85916E-86 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TENA_HUMAN | 52.239 % | 193 | 2.03E-52 |
| MFAP4_HUMAN | 48.293 % | 187 | 2.48E-55 |
| FBCD1_HUMAN | 50.249 % | 184 | 4.11E-52 |