- Transcript 'KH2012:KH.S115.3.v1....' >
- Transcript 'KH2012:KH.C2.36.v2.A...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C2.36.v3.A...' >
- Transcript 'Boleac.CG.SB_v3.S92....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S92.g15336.01.t
Possible name(s)
SLC6A2; SLC6A3; SLC6A4
Gene model
Location
S92 [245,981 / 252,823]
Amino acid sequence
Length: 627
>Boleac.CG.SB_v3.S92.g15336.01.p
MGEPTTEAAPDTQNQPRNGRILYTRRDSNMDDVFAPNPPTKPSDWRRTSADFKRMLAVRG
DSVESERFLTRTLSADSNDGREKWTRKFDFLLATIGFAVDLGNVWRFPYICYKNGGGAFL
IPYILMVLLGGIPLFYLELALGQYHRNGCISIWRRICPILKGVGYAICLMALYVSSYYNT
VIAWAVFYLYSSFTTELPWSHCNNSWNDNSTCVDKIVAASHNQSWSNTSQSPSEQFFERH
VLESFKSTGLENLGSPKWQIVICLFIVYVMIYFSLWKGVKSSGKVVWFTATFPYVVLLIL
LVRGVTLPGAEKGIEFYLKPNWEALLHTGVWLEAATQVFFSLGPGFGTLLALASYNDFHN
NCYRDALITSAINCFTSFLAGFVVFSVLGYMAHLLHKEDISEVTTPGVGLLFVVYSQALT
TFDGSVFFSIMFYLMIITLGLDSTFGGLEAVVTGFADEFPKTVGKHRELFVLGLLCVSFL
LSLSTTTYGGIYMVTLMETYATGTAIMTVVLLEAIAVSWYYGIDRVCHDIRSMIRTSPGI
YWTVCWKYISPLFLMFMIVMSFASTPELQHGIYKYPEWSKGVGWAITLSSLSLVPAYAIY
RTITKRRKRRFRKPTRVEQGSHADDFM
Nucleotide sequence
Length: 2,190
>Boleac.CG.SB_v3.S92.g15336.01.t
AGTGGTATAATCTAGTTTTTAACATAAAAAATGGGTGAGCCCACTACAGAAGCGGCACCG
GATACTCAAAATCAGCCAAGAAATGGTAGAATTTTATACACCCGTCGAGACTCCAATATG
GACGATGTTTTCGCGCCTAATCCTCCAACCAAACCATCTGATTGGCGGAGAACAAGCGCC
GATTTTAAACGCATGTTAGCCGTGAGAGGTGACTCAGTCGAGTCAGAGCGATTTCTGACT
CGAACCCTATCAGCTGACTCAAATGACGGGAGGGAAAAGTGGACCCGGAAATTTGATTTT
CTACTCGCCACGATTGGATTCGCGGTCGATCTGGGAAATGTTTGGAGGTTCCCGTATATC
TGCTACAAAAACGGCGGAGGTGCGTTCCTGATTCCTTACATCTTGATGGTTCTACTCGGG
GGAATCCCCTTGTTTTATCTCGAGCTCGCGTTAGGGCAATATCATCGAAACGGATGCATT
TCAATTTGGAGACGAATATGCCCGATTTTAAAAGGGGTCGGATACGCGATCTGTCTGATG
GCGTTGTACGTATCAAGTTATTACAACACGGTCATCGCGTGGGCCGTCTTCTACCTCTAC
AGTTCATTCACCACTGAGCTCCCGTGGAGTCATTGCAACAACTCATGGAATGACAACTCG
ACTTGTGTTGATAAAATAGTCGCCGCATCTCACAACCAATCATGGAGCAACACGTCACAA
TCACCATCAGAACAATTTTTTGAACGCCACGTTTTGGAATCGTTCAAATCCACTGGTTTG
GAGAACCTCGGATCACCGAAATGGCAGATTGTGATTTGTTTGTTCATTGTTTACGTCATG
ATCTACTTTAGCTTGTGGAAGGGAGTCAAGTCGTCAGGAAAGGTGGTGTGGTTCACTGCG
ACATTTCCATACGTGGTTCTACTGATTCTGTTGGTGCGTGGGGTGACTCTGCCTGGTGCA
GAGAAAGGGATAGAGTTCTATTTGAAACCAAACTGGGAAGCATTATTGCATACCGGCGTC
TGGCTTGAAGCAGCAACTCAGGTGTTCTTCTCGCTTGGGCCAGGATTTGGGACACTTCTG
GCGTTGGCGAGCTACAACGATTTTCACAACAATTGTTATCGCGACGCGTTGATCACTAGC
GCCATCAACTGTTTCACAAGTTTTCTCGCTGGTTTTGTCGTCTTCTCCGTACTCGGATAT
ATGGCTCATCTGCTCCATAAGGAAGATATTAGCGAGGTCACGACCCCAGGTGTTGGACTC
TTATTCGTGGTTTATTCGCAAGCTCTGACTACGTTTGATGGCTCGGTGTTTTTTTCAATC
ATGTTCTACCTCATGATCATCACGCTGGGACTGGACAGCACGTTCGGTGGACTTGAAGCT
GTAGTGACGGGATTTGCGGACGAGTTTCCAAAGACAGTCGGAAAACATCGAGAGTTGTTT
GTTCTGGGGTTGCTATGCGTCAGTTTCCTCCTCAGCTTGTCGACAACAACATACGGAGGC
ATCTACATGGTGACTCTTATGGAAACGTACGCGACCGGGACGGCAATCATGACGGTGGTA
CTGTTGGAGGCTATCGCAGTCAGCTGGTACTACGGTATTGACCGTGTTTGCCACGACATT
CGCTCCATGATTCGGACATCGCCCGGGATTTATTGGACGGTCTGTTGGAAATACATCAGC
CCTCTATTTTTAATGTTTATGATTGTGATGAGTTTTGCCTCGACGCCAGAGCTCCAGCAT
GGCATCTACAAATACCCGGAATGGTCGAAAGGAGTCGGATGGGCGATAACCCTATCTTCA
TTGTCATTAGTACCCGCTTACGCCATCTACCGGACGATTACAAAAAGGCGTAAAAGAAGG
TTTCGGAAGCCAACTCGAGTTGAACAAGGATCGCACGCCGACGACTTTATGTGACCTGTG
ACGTCGGTTACGTTTCACCGATTTCAATTGCAGACGACGCGTTTGAATATGTCATACATA
GCTTTATCACGTAACAATGCACTTCAATCCAAATGTCGGAAATTAACGATCGTCGATTAT
ATGAACTTTGACCCACTGCCTGATTGGCCCAAGTTTTTTCTCGTTTTAAATTTTTTTGCA
AATTAAATTGTCGAAATCATGAGTAATATTTTCCCGTTGACCGAACGGGGGTTTGGTTTT
TATTGTTTCGAAACAAATATTGAATATTCC
| PANTHER |
Na/ntran_symport (IPR000175) - T[67-606] 2.4E-247 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[80-607] 102.975 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[81-602] 8.63E-168 |
| Pfam |
Na/ntran_symport (IPR000175) - T[81-603] 2.4E-216 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[89-110] 1.7E-74 - T[118-137] 1.7E-74 - T[162-188] 1.7E-74 - T[285-302] 1.7E-74 - T[367-387] 1.7E-74 - T[422-441] 1.7E-74 - T[503-523] 1.7E-74 - T[543-563] 1.7E-74 |
| ProSitePatterns |
Na/ntran_symport (IPR000175) - T[105-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC6A2_HUMAN | 51.123 % | 616 | 0 |
| SC6A3_HUMAN | 49.647 % | 581 | 0 |
| SC6A4_HUMAN | 57.798 % | 670 | 0 |