- Transcript 'Boleac.CG.SB_v3.S924...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S924.g15359.01.t
Possible name(s)
FCN2; FIBCD1; TNXB
Gene model
Location
S924 [20 / 3,996]
Amino acid sequence
Length: 331
>Boleac.CG.SB_v3.S924.g15359.01.p
MRLIAIFACLLCAFKSAWSTCGAQDFSDLLSQHCQSWCGSAAPQGSTFTPRVGTAGPKGD
AGSRGPIGSPGEPGISGSPGPEGRQGEAGPPGRVNMTEISRIIKSEVESAIAFLNIKSCE
DVSVNAAKSWNGSGGVFEIASPIKFGRLDVYCDVTTDGGKWTVIQRRVDGSLDFYRDWRS
YADGFGNVNGEFWLGLKIIHELTKGRDQELKIDMIDINGVQYTAKYSTFYIGVEYDQYKL
TVGGFSGNASDSMVYHNNLKFTTKDRDHDTSGTSNCANDRKGAWWYGSCAFSNLNGDYEN
TSGWPGVVWYNHGTKQRMYMRYTEMKIRRKK
Nucleotide sequence
Length: 1,633
>Boleac.CG.SB_v3.S924.g15359.01.t
GTTCTATCGAATAGTGGGACGCTTTGAAGAAGATCGTGTTACGCATAAGCGTAATTACCG
GGAGTGCAGAGCGTGCGACATGCGACTCATTGCGATATTTGCCTGTCTGCTGTGTGCCTT
CAAATCAGCATGGTCCACTTGTGGCGCACAGGATTTCAGCGACCTTCTCAGTCAACATTG
CCAGTCATGGTGTGGATCTGCTGCTCCTCAAGGGTCTACTTTCACTCCAAGAGTAGGCAC
GGCGGGCCCTAAAGGAGATGCTGGATCAAGGGGACCTATTGGTTCTCCGGGAGAACCCGG
AATCTCCGGATCACCGGGCCCAGAAGGACGGCAGGGTGAAGCCGGGCCGCCAGGAAGAGT
AAACATGACAGAAATCAGTCGAATAATAAAGAGCGAAGTAGAATCAGCCATTGCCTTTCT
GAATATTAAAAGTTGCGAAGACGTTTCGGTCAATGCCGCAAAGTCATGGAACGGATCGGG
CGGTGTCTTTGAAATCGCAAGTCCAATCAAGTTCGGACGTCTTGACGTATATTGTGACGT
CACAACTGATGGCGGGAAATGGACGGTTATTCAAAGACGAGTCGATGGCTCTTTGGATTT
CTACCGCGACTGGAGAAGTTATGCAGACGGATTCGGGAACGTAAACGGAGAATTCTGGCT
TGGGCTTAAAATAATTCATGAATTGACTAAGGGCAGAGACCAAGAACTCAAAATTGACAT
GATCGACATAAACGGCGTTCAATACACTGCCAAGTACAGTACCTTCTACATCGGAGTAGA
ATACGACCAGTACAAACTGACGGTGGGCGGATTCTCTGGAAACGCATCGGACTCGATGGT
CTATCACAACAACTTAAAATTCACCACAAAAGATCGTGACCATGACACCAGTGGAACCTC
AAATTGCGCAAACGATCGCAAAGGCGCTTGGTGGTACGGCAGCTGCGCCTTCAGTAATCT
CAACGGTGACTACGAAAACACGTCTGGTTGGCCGGGAGTGGTTTGGTATAACCATGGAAC
CAAACAACGCATGTATATGCGCTACACTGAAATGAAAATCAGACGAAAGAAGTGACGCCA
GTGATCACGTAATGGACTGTTCGGTGACGTCATAATTCAACTGACTTAAATTAGTTACCA
GTAGTGTAAACGCACAAATCACAAATTGCTACCACGCAAGCCTCAGATGATTGTCCTATT
GATTGCCCCGGATGTAGAGCGCAGTTCAATTCAAATTAACCAATCATGCAATCTTGTGCC
CCGAATCGGCGATTGCCTTTTAAGGCATCGCCCTTGCGCATAAGCTCATTTGCGCATCGA
TTGGCGTAGGGGATGGGCCGTCGTTAGTTGTACGTTCTGTTCATTATTCACGCTTTGTNG
TTTCNTTTAGAGTAAAGGGTTTCGCTCATTTGTTTCGTGTTTTTAGAACTGTTTTATTGC
TGTGTCAGATAAGAAGGATATTGTTCTTAACCGTGCTTTTAAGTCGTTCGCTTTTAAATC
AACAAAATAAACAGGATTTTAATCAAGAAAGGTTTTATCTGTTTGCGGACGGTTTGAAAG
AGCGAGTCTTTGGGCTATCCATAACAGCAACGCGACAACACTGTACGCTCTACCCGTGTG
CCCAGAGTCAGTG
| Pfam |
Collagen (IPR008160) - T[53-92] 1.1E-6 |
| ProSiteProfiles |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[110-331] 50.814 |
| SMART |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[114-330] 3.4E-80 |
| Pfam |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[117-328] 1.6E-57 |
| CDD |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[117-330] 4.16729E-91 |
| SUPERFAMILY |
Fibrinogen-like_C (IPR036056) - T[117-329] 2.49E-70 |
| ProSitePatterns |
Fibrinogen_CS (IPR020837) - T[284-296] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FCN1_HUMAN | 40.845 % | 182 | 4.63E-55 |
| FCN2_HUMAN | 38.636 % | 168 | 5.23E-50 |
| FBCD1_HUMAN | 45.701 % | 171 | 1.29E-49 |