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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L18.5.v1.A...'
  2. Transcript 'KH2012:KH.C6.20.v4.A...'
  3. Transcript 'Phmamm.CG.MTP2014.S4...'
  4. Transcript 'Boleac.CG.SB_v3.S923...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S923.g15358.01.t

Possible name(s)

DEPDC1; DEPDC4; DEPDC7

Location

S923 [28,015 / 39,180]

Sequences

Amino acid sequence

Length: 619

>Boleac.CG.SB_v3.S923.g15358.01.p
MSKSSKPPLGSKSPLGGQFKATNIWKDLVAHLYDNANIKRRRVMMKSHNDCFSGGNAVDT
LLRYVHANPSXFPNTTMVARENICRLCQSFMDANVFECINAGEDSEKKSKFEDSASRLYR
FNPDNQSIITSDHKVAESAHNTIKRNALPSPSYAKSLPTKFRFLSTVPQSTEMTVKQREA
FSPFVFRGRKKSTSVHGKICTGSSCTSDSDSENIRPKSMTRKSPRLKRRASFVGMVMRRS
SSDPSMNKEHSTGSSSETEYKHQSPGDHLPRSMMRLGERLSFRKKSLRRPSLPGLGKPPQ
HDLRVGKIRQLVIPSQLQQASVIQNLAAGEEPCSLQGNVILRNEPKRRSAKSMIPTDNCS
KVKVLSSRPIERKLTRREESHVKRESVRVRLLQLLDLPFIETLVISPVFDKKVLLPTDDD
QMARFNRMNYGEVALAYDNDDSWIFNALTVLSHIPESYNILKKYAVLPNHRKKLELFYAI
AAHYKSLQRPLIDENFNAIATAIINMLASQPVGKVMEPMQLFFHLLPEPRLCELRHLCMF
LHSVCSQKQVKLAHKVDATYCPLISEDEYKRQKVQFTEMEVFNLYRDIEESSIPPKKKKD
LLKRFQRQHPEIFQMVNTE

Nucleotide sequence

Length: 1,900

>Boleac.CG.SB_v3.S923.g15358.01.t
CACGAGAATTATTTATCTTTCACTCGTTGGTGAAGTAACTGCAATGTCGAAAAGTAGTAA
GCCGCCATTAGGCTCTAAAAGTCCTCTGGGTGGTCAATTCAAAGCTACAAACATTTGGAA
GGATCTTGTTGCGCACCTATATGACAATGCTAACATAAAAAGGAGAAGAGTCATGATGAA
ATCTCATAACGATTGCTTCAGTGGCGGCAATGCTGTGGATACTCTCTTGCGATATGTTCA
TGCCAATCCAAGCANATTTCCAAACACTACCATGGTGGCCCGAGAGAACATATGTAGACT
GTGTCAGAGTTTCATGGACGCTAATGTATTTGAGTGTATAAATGCTGGAGAAGATTCAGA
AAAGAAATCCAAGTTTGAAGACTCGGCTTCGAGATTGTATCGTTTCAATCCCGACAATCA
ATCGATCATCACCAGTGATCACAAAGTCGCCGAATCTGCCCATAATACAATCAAAAGGAA
TGCCCTACCCAGTCCAAGTTATGCCAAAAGTCTACCAACTAAGTTTCGATTCTTGTCTAC
TGTACCACAAAGCACAGAGATGACTGTCAAACAGCGAGAGGCATTCTCGCCATTTGTATT
CAGAGGTCGTAAGAAGTCTACATCTGTGCATGGAAAAATCTGCACCGGTAGTTCTTGTAC
TAGCGATTCTGACTCGGAGAATATACGACCTAAATCTATGACCAGGAAATCTCCAAGACT
GAAGAGACGGGCAAGTTTTGTTGGCATGGTAATGAGACGCTCTTCCTCTGATCCCAGCAT
GAATAAAGAGCATTCTACAGGCTCCTCCTCAGAAACTGAATATAAACACCAAAGTCCTGG
TGACCATCTTCCGAGAAGCATGATGAGGCTCGGTGAGAGGCTCTCATTTAGGAAGAAATC
TCTTCGCAGGCCCTCATTACCTGGTTTAGGGAAACCACCGCAACATGATCTACGTGTTGG
TAAGATACGTCAGCTCGTCATCCCAAGCCAACTACAACAAGCCAGTGTGATCCAAAATCT
GGCTGCTGGGGAAGAGCCATGCTCATTGCAAGGAAATGTTATCCTGAGAAATGAACCCAA
GCGTAGAAGTGCAAAGTCGATGATACCAACTGACAATTGCAGTAAAGTAAAAGTTCTCAG
TAGCAGGCCTATTGAAAGAAAACTGACAAGACGTGAAGAATCTCATGTAAAGAGGGAGAG
TGTACGAGTCCGCCTTCTTCAACTTTTAGATTTGCCCTTCATTGAAACACTTGTGATATC
TCCTGTTTTTGACAAAAAGGTGTTGTTGCCGACTGACGATGATCAAATGGCAAGATTCAA
CAGAATGAATTATGGTGAAGTAGCATTGGCCTATGACAATGACGATTCATGGATATTCAA
TGCTCTCACTGTACTTTCACATATTCCAGAGAGCTACAATATATTGAAGAAATATGCAGT
ATTACCTAACCATAGGAAAAAATTAGAGCTATTTTACGCTATTGCCGCTCACTACAAATC
ATTGCAACGTCCTTTAATTGATGAAAATTTCAATGCAATAGCAACAGCAATCATCAACAT
GCTCGCCTCTCAACCTGTTGGAAAAGTTATGGAGCCTATGCAATTGTTTTTTCACTTGTT
ACCAGAACCGAGATTATGTGAACTTCGACATCTTTGTATGTTTTTGCATTCAGTTTGTAG
CCAGAAGCAAGTCAAACTGGCTCACAAGGTTGATGCGACATACTGTCCATTGATATCCGA
GGACGAATATAAGCGGCAGAAAGTCCAATTCACAGAAATGGAAGTATTCAATTTGTACCG
AGACATAGAAGAGAGCTCAATTCCACCAAAAAAGAAAAAGGATTTACTCAAAAGATTTCA
GCGACAACATCCGGAAATATTTCAGATGGTCAACACAGAA

InterProScan

Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[14-122] 7.6E-27
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[22-143] 9.25E-11
SMART
DEP_dom (IPR000591) - T[32-123] 2.5E-8
ProSiteProfiles
DEP_dom (IPR000591) - T[32-123] 9.008
Pfam
DEP_dom (IPR000591) - T[37-121] 1.6E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value