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  1. Transcript 'Boleac.CG.SB_v3.S922...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S922.g15350.01.t

Possible name(s)

RAB18; RAB2A; RAB2B

Gene model

Boleac.CG.SB_v3.S922.g15350

Location

S922 [7,712 / 11,543]

Sequences

Amino acid sequence

Length: 248

>Boleac.CG.SB_v3.S922.g15350.01.p
MESDVLTTLKILIIGESGVGKSSLLLRFTDDKFDPDQPATIGVDFKMESDVLTTLKILII
GESGVGKSSLLLRFTDDKFDPDQPATIGVDFKVKALTINGNTVKLAIWDTAGQERFRTLT
PSYYRGAQGVIFVYDCTRADTFSRIGAWLTELETYATKPNIVKMLVGNKIDKDDRTVQRA
DGLKFARKHAMLFIEASAKTKDGVECAFEELVEKIIQTPGLWDKEGQRGNTGVTLNSNSS
DQAGACSC

Nucleotide sequence

Length: 1,417

>Boleac.CG.SB_v3.S922.g15350.01.t
TTTTCTGCAGTTCTAAATACCATATGAATATTTAATTTATATATACCGGTACCTGTACAA
CCTTGCTAATTACTCCCTTGAACGTAAATTTTGTACCAAATCACAACACCAACTAGTGAG
GACTTGACTGTGAACCTGAAATTTTTGTAACCACTGTCATTGTGTGAACGTGAAGATGGA
ATCTGATGTACTGACGACATTGAAGATTTTAATAATTGGAGAGAGTGGTGTGGGAAAGTC
GAGTCTACTCCTGCGATTCACTGATGATAAATTTGATCCTGACCAACCAGCAACTATTGG
AGTTGATTTCAAGATGGAGTCTGATGTACTGACGACATTGAAGATTTTAATAATTGGAGA
GAGTGGTGTGGGAAAGTCAAGTCTACTCCTGCGATTCACTGATGATAAATTTGATCCTGA
CCAACCAGCAACTATTGGAGTTGATTTCAAGGTGAAAGCACTTACCATTAATGGAAATAC
AGTGAAATTAGCAATTTGGGATACAGCCGGTCAAGAACGTTTCCGCACCCTCACACCAAG
TTACTATAGAGGTGCTCAAGGCGTTATATTTGTTTATGATTGCACTAGGGCAGATACATT
CTCACGGATTGGAGCTTGGCTCACTGAACTCGAAACGTACGCCACCAAACCAAATATTGT
GAAAATGCTTGTCGGAAATAAAATAGATAAAGATGACAGGACAGTGCAACGAGCGGACGG
TTTGAAATTTGCTAGGAAACATGCAATGCTATTTATTGAAGCCAGCGCAAAAACCAAAGA
TGGAGTAGAATGCGCATTTGAAGAATTGGTGGAAAAAATTATACAGACTCCTGGCTTGTG
GGATAAAGAGGGACAAAGGGGTAATACTGGTGTTACACTAAATAGTAATTCGTCTGATCA
AGCAGGGGCATGTTCCTGTTGAAGCAATCCTTTAATGGGACTGACTTCCAANCATGCTGC
CTAGCTCATGTCTTACAGTATAATGAGAAACGGAAGTTACTGGAATCTGTGGGTACCTGT
GTGTGCGTGTAGTCTTACAAATCATGAATATCTTTTGGTACTTATAATATTATATCGTAT
TTAGTGTGCTTTTCTTATTGGATATAGTAATGGTCAATTTGGGTACCCCCTGCGTAATTT
GTAACATTTACCATTTTCTGAAATTAATTGATTAACTGTCGAGGCTAGTTTGTGGAAAGA
GTGTTTCTGATGTAAATGCTCTCTATACCATTGAATCTGCCAAAAATTTTCAATGGCAGA
CTGACAGTCTCTCATGCTCACTTGCCCAGGCTGCGGCTATTTTTCGATGGAGATATTTTA
TTCATATCTGCTGAATATATGTGTGATACTCTTATCTTATTGGCCCAAGTATAATACTTC
ATAGGTTGGCAGACTGGTGTGTGCTGTTTCTTGTGCA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[8-48] 8.3E-11 - T[52-220] 8.5E-55
ProSitePatterns
Sigma_54_int_dom_ATP-bd_1 (IPR025662) - T[11-24] . - T[57-70] .
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[54-210] 1.7E-32
Pfam
Small_GTPase (IPR001806) - T[56-216] 1.6E-54

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAB18_HUMAN 76.44 % 300 4.53E-104
RAB2A_HUMAN 49.425 % 168 4.12E-52
RAB2B_HUMAN 49.425 % 166 1.61E-51