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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S8.g...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S8.g14305.01.t

Possible name(s)

TRIM2; TRIM3; TRIM63

Location

S8 [549,519 / 552,780]

Sequences

Amino acid sequence

Length: 272

>Boleac.CG.SB_v3.S8.g14305.01.p
MDQIEQLLTCPVCLDRFNEPKILPCQHTFCLRPCLQNIVQDRSIRCPECRSFHLLPRNGI
NGLPPNLTIVRFLDLPNHQNSTQASQCKECGKNNCETEKCNHCDKPLCKVCFTKHTRNLQ
QELKLTVSQIKRVIPKVSEFVTDLEQRQKKSKENGKNIKHEIAQSIDRCIAELQSRKRFL
FEEVDAFVTVETRSLQSEQDNLEMDIATLRSHCEIADEKCNPSLDADNAMSSSSKRRFQS
EILQLNRQGREHIRNNKLVSSNLEDKMGRSIK

Nucleotide sequence

Length: 816

>Boleac.CG.SB_v3.S8.g14305.01.t
ATGGATCAAATTGAACAACTGCTGACTTGTCCTGTTTGTTTGGATCGTTTTAATGAGCCG
AAGATACTTCCGTGTCAACATACATTCTGTTTGAGGCCTTGCTTGCAGAATATCGTTCAG
GATAGAAGCATTCGTTGTCCAGAATGTCGTTCGTTTCATCTTCTGCCTCGTAACGGGATC
AACGGACTTCCTCCTAACTTGACAATCGTCCGGTTTTTAGACTTGCCTAATCATCAAAAT
TCAACTCAGGCCTCTCAATGCAAGGAATGTGGCAAGAACAATTGTGAAACTGAGAAGTGC
AACCACTGTGACAAACCTTTGTGCAAAGTCTGCTTCACAAAACACACTCGAAATTTACAA
CAAGAATTGAAATTGACTGTTTCCCAGATCAAACGCGTTATTCCAAAAGTCTCAGAATTT
GTGACAGATTTAGAGCAAAGACAGAAAAAGTCAAAGGAAAACGGGAAAAATATTAAACAC
GAAATTGCGCAGTCAATAGACCGTTGTATAGCAGAACTGCAGTCCCGCAAGAGATTCCTT
TTTGAAGAAGTTGATGCATTCGTAACTGTAGAAACAAGATCTCTCCAGAGTGAGCAAGAC
AACTTAGAGATGGACATAGCGACGTTGAGAAGCCATTGTGAAATCGCTGACGAAAAATGC
AACCCTTCACTAGATGCCGACAATGCAATGAGTTCATCCTCGAAGCGACGATTCCAAAGT
GAGATACTGCAGTTGAATCGCCAAGGTCGAGAACACATCCGAAATAACAAACTTGTCTCA
AGTAACTTGGAAGATAAAATGGGAAGATCAATAAAG

InterProScan

Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[1-83] 1.4E-16
ProSiteProfiles
Znf_RING (IPR001841) - T[10-50] 10.955
Pfam
Znf-RING_LisH (IPR027370) - T[10-47] 4.9E-9
SMART
Znf_RING (IPR001841) - T[10-49] 3.1E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value