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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S894...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S894.g15064.01.t

Possible name(s)

PPP1R8; SLC4A1AP; SNIP1

Gene model

Boleac.CG.SB_v3.S894.g15064

Location

S894 [29,891 / 35,763]

Sequences

Amino acid sequence

Length: 405

>Boleac.CG.SB_v3.S894.g15064.01.p
MAREDVKSESRSKKHRRKEVSSSESESSHSDQESPVRHQKSQKVRHTDNSKKKAEKHHKR
KREKEKSSESSDDSGSPPKQAKNSRDKQHNSRRHRETYSHSKHPDKDLSRKHHRDRDAEK
QKQDSKIRRERSPAMRIKQEEDFDQRQEEIRRKRRRDNVHEERNSHHVKVKQERLSDEEX
RQNRRRDGRGNRNRKDIERERRANDARRAEAWQKRERQGGQNAEALLEDTSEPKEKEKPN
LGLSGALTEDTNTYRGVVIKYSEPPEAKVPTKKWRLYPFKGDEALKVLHLHRQSAYLLGK
LRRIADIPIDHPSCSKQHAVFQFRLVEVEREDGKKKRIVKPYIIDLESANGTFVNNQKIQ
PRRYVELKEKDVLKFGFSSREYVLIHDKSDTTGVDVSGEENSDED

Nucleotide sequence

Length: 2,357

>Boleac.CG.SB_v3.S894.g15064.01.t
TTCTCTTGCAGATCGAANCTATTTAGGCCTTGGCTTACTAAATAGGCTACTATTCCTGAC
AGTGATCTACATATTCTCGGAAATGGCTCGTGAAGATGTCAAATCAGAGTCACGATCAAA
AAAGCATCGTCGTAAAGAAGTGTCATCATCAGAGTCTGAATCNTCACATTCTGATCAGGA
GTCACCTGTACGACATCAAAAGAGTCAGAAAGTGAGGCATACTGATAACAGCAAAAAGAA
AGCGGAAAAACATCATAAACGAAAACGCGAAAAAGAAAAATCATCAGAGTCGTCTGATGA
CTCTGGAAGTCCTCCAAAACAGGCAAAAAACAGCAGAGACAAGCAACACAACTCACGACG
CCATCGTGAAACTTATTCACATTCGAAACACCCTGACAAAGATTTATCCAGAAAACATCA
CCGGGATCGAGATGCTGAAAAGCAAAAACAGGACTCGAAAATCAGGCGTGAAAGATCACC
TGCTATGAGGATTAAACAAGAAGAAGATTTTGATCAAAGGCAGGAGGAAATTCGACGAAA
ACGAAGGAGAGACAATGTACATGAAGAGAGAAATTCACACCATGTCAAAGTTAAACAAGA
ACGTCTCTCTGACGAAGAAGNGAGACAAAATCGACGACGTGATGGAAGAGGTAACAGAAA
TCGAAAGGATATTGAACGGGAAAGAAGAGCAAATGATGCAAGAAGAGCTGAAGCATGGCA
AAAAAGAGAAAGACAAGGGGGTCAAAATGCAGAGGCACTGTTAGAAGATACTTCAGAACC
AAAGGAAAAGGAGAAGCCTAATTTAGGACTGTCGGGCGCTTTAACTGAAGACACCAACAC
CTACCGTGGCGTGGTCATTAAATACAGTGAACCTCCAGAAGCTAAAGTCCCTACCAAGAA
ATGGAGGTTGTACCCTTTCAAAGGAGATGAAGCATTGAAGGTGCTTCATCTGCACAGGCA
AAGTGCATACCTCCTTGGAAAGTTGCGACGAATCGCTGATATTCCCATTGATCATCCATC
TTGTTCAAAACAGCATGCAGTTTTTCAATTCAGATTGGTAGAAGTGGAAAGGGAAGATGG
TAAGAAGAAGAGGATAGTGAAGCCTTATATTATAGACTTGGAATCTGCCAATGGTACGTT
CGTCAACAACCAAAAGATCCAGCCTCGACGGTATGTCGAGCTGAAGGAAAAGGATGTGCT
GAAATTTGGTTTCAGCTCAAGGGAGTATGTTCTCATACATGACAAATCAGATACAACTGG
GGTCGATGTGTCCGGAGAAGAAAATAGTGATGAAGATTGAACATGAACATGAACTTGTTG
GAATGAATAGTGGTGGAATATGACTTCCCTTCCTTGATGATGCCGATGGTGACGGAGGGA
CTGAACTGACAACTTCGTCCTGTTGTTCATTAAGTAGTGACATCTGAATAACAAAGTGTG
AGGAACATAGCATGGGTCAAGGGTCATGGTACCATGATAATGGTCTATGCTCATCCCATT
AAATCTGCAACTGGGTGCAGCGGCATTAGGCCTACTAGACTATGCACTGATATCTACAAT
GTCAGTAATATGCCTTGGCTACTCTCTGAATTTCCATATAATAAGAACATTGCCAGTGTT
TTCTCCAATTTTTTATAGTGAGTGTTTAGGAAATGTGCGACAAACCAGGAGTCTGGTCGG
TGGACCCTCAAAACTGTGGGTGGTGACCTTATTGATGTTGTTCACCTCAGCATGGATGCG
AAACTGCATGTTATGAGCTCTCACCCTGCTATAGCTGGTGAATTTGAGTCTTGTATCGCT
CAAGTCAGTACTATTGAATTAAAGTCAGCTTTTGAGAAGTTGTATACGTGGCAGAGTTTA
GACCTTTAGAGGGAACACTGCCTATGTAAAGTGATATATTGCAAGCACTGCCAAATTTCA
TTTGAAGACATTGCTGATTGATATGGAATTGTAGATACTGACTGCTAGCTCTCTGAAGGG
GAAGTGTGTGTAACTGAGATTTTTATAGTTTAACCTGCAAGTAAAATGGTGGCAAGTAGA
ACCCATAGGTCCTGTAGCTCATGTGCAGTCTAGCAAGTTGACTCGCAAAACGGTTATCTC
CTCCAATGGGCGGTGTTACATCACCATTCATTGATCAATATTCGTATTATGTGCTGTTGC
CATTTGATGTGCAAACTGAGAAGTGACTAGGTAGTTTAACTTGATTTTTCACTTATAGAA
TTTGACATGGTGCTCAATCTGGTTGCAGTTGCAAGAGTATTATATTTGATACTCCATTTG
ATGTATTCATTGAATTTCATAAAATTTTGCTTACAGTATGGCTTGCCGCTTCTGGTACAT
CATTTGCTTGACTGTGC

InterProScan

SUPERFAMILY
SMAD_FHA_dom_sf (IPR008984) - T[250-386] 2.3E-25
CDD
FHA_dom (IPR000253) - T[273-376] 2.77678E-24
SMART
FHA_dom (IPR000253) - T[295-359] 4.1E-11
ProSiteProfiles
FHA_dom (IPR000253) - T[296-359] 10.179
Pfam
FHA_dom (IPR000253) - T[303-376] 2.1E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNIP1_HUMAN 54.483 % 280 2.77E-91