- Transcript 'Boleac.CG.SB_v3.S726...' >
- Transcript 'Boleac.CG.SB_v3.S883...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S883.g14983.01.t
Possible name(s)
DCAF13; POC1B; WDR88
Gene model
Location
S883 [2,088 / 7,497]
Amino acid sequence
Length: 443
>Boleac.CG.SB_v3.S883.g14983.01.p
MKIKVLSRNPDDYIRECNRDIQRIQRNYDPSLHPFEAPREYVRALNAVKLERVFAKPFIG
ALDGHKDGVSCLCKNKRRLNSIFSGSFDGEIRYWNLTTRRSLQHFQAHTGFVRGMTCSVD
GNIIISVGXDKTIKFWSTDPFKEDGSTPLNTIVYKNSFTGVDHHWKNGIYATSGDAICIW
NHEKADPVRTYKWGTDTVNSVSFNPVETSICASTASDRSIRLYDIRASAPLKKVIMKMRC
NKVCWNPMEAFVFTAACEDHNLYTFDMRNLSRAIRVHKDHVDAVLDVDYSPTGKEFVSGG
YDKTIRIFKKDSNRSREVYHTKRMQRVFCVSWSADDRYVLSGSDETNIRLWKARASEKIG
KVTPVEREATLYNEKLKEKYAHHPQIRRIAKHRHVPKSVYGAVKEKRTMLSSMRRKEMNR
IRHSKPGTFPEVAEKKKHIVNVV
Nucleotide sequence
Length: 1,699
>Boleac.CG.SB_v3.S883.g14983.01.t
GTTTTCAAGGTTGTCGTGGGAAAGCTCAGAAACCGGAAGTGGGAAATGAGAAGTGAGCCC
CACTGCTGGTTCGTGTGCGGAGCTGGGTTTGGAGCAGGCTATCGTGAGTCGTGACAACAG
ACTGCTCTGCAGGATGAAGATTAAAGTACTTTCACGGAATCCGGATGATTATATTCGTGA
ATGCAACAGGGATATTCAGCGAATTCAAAGGAACTATGATCCTTCTCTCCATCCGTTCGA
AGCTCCTCGTGAGTATGTGAGGGCTCTGAATGCAGTGAAGTTGGAAAGGGTCTTCGCCAA
ACCGTTTATAGGAGCACTTGATGGACACAAAGATGGCGTGAGCTGTTTATGCAAGAACAA
ACGAAGACTTAATTCTATCTTCTCGGGATCATTCGATGGGGAGATTCGATATTGGAATCT
GACAACAAGAAGAAGTTTGCAACATTTCCAAGCTCACACTGGATTTGTTCGAGGCATGAC
TTGCTCTGTGGATGGAAATATAATTATTTCAGTTGGTGANGACAAGACAATCAAGTTTTG
GTCAACTGATCCATTCAAAGAAGATGGCTCAACGCCACTTAATACCATTGTTTACAAGAA
CTCTTTCACTGGAGTTGACCACCATTGGAAGAATGGGATTTACGCAACATCCGGAGATGC
TATATGTATATGGAATCATGAAAAAGCTGACCCCGTTCGCACTTACAAGTGGGGAACAGA
CACTGTGAATAGCGTTTCCTTCAATCCAGTCGAAACAAGCATTTGTGCAAGTACAGCTTC
TGACAGGAGCATCAGACTTTATGATATCAGAGCTTCAGCTCCTCTCAAGAAAGTCATCAT
GAAAATGAGATGTAATAAAGTTTGTTGGAATCCAATGGAAGCATTTGTGTTTACAGCTGC
TTGCGAGGATCACAATCTGTATACCTTTGACATGCGTAATTTGAGTAGAGCAATTCGAGT
TCACAAAGACCATGTCGATGCTGTACTTGATGTGGATTATTCTCCCACTGGAAAAGAATT
TGTGTCTGGAGGCTATGACAAGACAATAAGGATATTTAAAAAAGATAGCAACAGGAGTAG
AGAAGTATATCATACAAAAAGAATGCAAAGAGTTTTTTGCGTTTCTTGGTCGGCAGATGA
CAGATATGTTTTATCAGGATCTGATGAAACAAATATACGATTGTGGAAAGCTAGAGCTTC
AGAGAAGATTGGAAAAGTTACACCAGTGGAAAGGGAAGCAACATTGTACAATGAAAAATT
GAAGGAAAAATATGCTCATCACCCACAAATTAGAAGAATTGCAAAGCATAGGCATGTGCC
AAAGTCCGTCTACGGTGCGGTCAAAGAAAAAAGGACCATGTTGAGTTCTATGAGGCGAAA
GGAGATGAACAGGATTCGTCATTCCAAACCTGGTACGTTTCCCGAGGTTGCAGAGAAGAA
GAAGCATATTGTCAACGTGGTATAAGTCTACCATTTTCACGGTGGGTGCCTGTTCCGCTG
ATCGAACCGCTCCTCGGATTGTGATAGGATTTCACGTCGCAGTTGGAGCTGCTGCAGGTT
GGAGTCGTAAGAGCGGGGTTACGTGACTACGGTGGTATCTTACCGTAACCTTATGTAGGG
GATATCACTCCATACTTTTTGAGATATTTGCCGATGTACCGGTACCGCATTTTCGCCGTA
ATAAAACTCTTCTGATCAA
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[12-352] 1.79E-58 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[45-143] 3.9E-18 - T[144-383] 6.2E-40 |
| SMART |
WD40_repeat (IPR001680) - T[55-95] 0.0031 - T[98-137] 5.3E-7 - T[145-181] 260.0 - T[184-224] 2.6E-4 - T[228-266] 120.0 - T[270-309] 1.8E-6 - T[311-352] 0.0015 |
| Pfam |
WD40_repeat (IPR001680) - T[61-95] 0.035 - T[101-137] 3.4E-4 - T[187-224] 0.049 - T[275-308] 3.1E-4 - T[323-352] 5.0E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[62-104] 11.077 - T[105-137] 10.642 - T[277-318] 10.943 - T[320-361] 10.809 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[62-361] 31.323 |
| Pfam |
Sof1 (IPR007287) - T[353-439] 1.3E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DCA13_HUMAN | 59.31 % | 573 | 0 |