Aniseed - Transcript Card

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S81.g14427.01.t

Possible name(s)

TPM2; TPM3; TPM4

Gene model

Boleac.CG.SB_v3.S81.g14427

Location

S81 [111,506 / 114,287]

Sequences

Amino acid sequence

Length: 277

>Boleac.CG.SB_v3.S81.g14427.01.p
MEAIKKKMTMLKADKENAMDRAEQAEVDKKSMEDKVGKLEEELHNLEKRVKATEDDLATA
REKLNSSQDSLTAAEKKASDAEQEVASLNKKIAGLEDQLESDQEKLSMTQEKQEDAEKAA
DESERGRKVIENRTIKDEERLGQQEANLKEAKEIAEDADRKYEEVARKLAAVEMELERAE
ERAELAEGRSTELDEEMKNAANNLKSLEAAAEKFSTKQSQYEDEIKTLNERLKDAEDRAD
VAEKSVVDLEKTIDELEDELHSQKVRMRDVNEDLSAY

Nucleotide sequence

Length: 1,015

>Boleac.CG.SB_v3.S81.g14427.01.t
AGAGCGTCTGTAGCTTTGATAGCGCGCCTTTCACCCCGGTGGAAAAAAAGCTTAAAAAAT
GGAGGCAATCAAAAAGAAAATGACGATGCTGAAAGCAGACAAGGAAAACGCGATGGACAG
AGCGGAGCAAGCAGAGGTTGATAAAAAGTCAATGGAAGATAAAGTCGGCAAGCTAGAAGA
GGAACTGCATAATTTGGAAAAGCGTGTGAAAGCAACGGAGGACGATTTGGCAACAGCACG
CGAGAAATTGAATTCAAGCCAAGACTCTTTGACTGCAGCGGAGAAAAAAGCTTCCGATGC
AGAACAGGAAGTGGCTTCCCTCAACAAAAAAATTGCTGGTCTTGAGGACCAGCTGGAAAG
CGATCAGGAAAAGTTGTCAATGACACAAGAAAAACAGGAAGATGCTGAAAAGGCCGCCGA
TGAAAGTGAACGGGGACGAAAGGTTATTGAGAACAGGACGATAAAAGATGAAGAGCGACT
TGGTCAGCAAGAAGCTAATCTCAAAGAAGCAAAAGAGATTGCTGAAGATGCTGATCGCAA
ATACGAAGAAGTGGCGAGAAAGCTTGCCGCTGTCGAGATGGAACTAGAAAGGGCGGAAGA
AAGAGCCGAATTAGCCGAAGGACGATCAACTGAACTCGATGAGGAAATGAAAAATGCTGC
CAATAATCTAAAATCGTTAGAAGCTGCAGCTGAAAAATTTTCTACGAAACAGTCACAGTA
TGAAGACGAAATTAAGACTTTGAATGAAAGATTGAAAGATGCCGAGGATCGTGCTGATGT
TGCCGAAAAGTCAGTTGTGGATTTAGAAAAGACGATAGATGAGCTTGAAGACGAACTTCA
CAGTCAAAAGGTTAGGATGAGAGATGTAAACGAAGACTTGTCTGCTTACTGAGGACGAGG
ACAATTTTCTCAATCATGTAGACTACAGGCCTACACTATGCATAATTGCATACATGTTAT
TTGCATTACTTCATTTATGATAAAAACAATTTCGAGCATATCTATAATGATGGGC

InterProScan

Pfam	Tropomyosin (IPR000533) - T[48-274] 1.1E-72
PRINTS	Tropomyosin (IPR000533) - T[84-101] 7.1E-51 - T[120-140] 7.1E-51 - T[145-173] 7.1E-51 - T[175-198] 7.1E-51 - T[231-256] 7.1E-51

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TPM3_HUMAN	60.584 %	277	1.09E-93
TPM1_HUMAN	60.949 %	296	3.42E-101
TPM2_HUMAN	59.854 %	268	6.06E-90