- Transcript 'Cisavi.CG.ENS81.R7.2...' >
- Transcript 'KH2012:KH.C14.237.v2...' >
- Transcript 'Cisavi.CG.ENS81.R12....' >
- Clone 'cima880136' >
- Transcript 'Boleac.CG.SB_v3.S765...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S765.g13969.01.t
Possible name(s)
CHAD; LRIG2; LRRTM1
Gene model
Location
S765 [23,182 / 28,386]
Amino acid sequence
Length: 239
>Boleac.CG.SB_v3.S765.g13969.01.p
MSENNLKELNYFTFRGLFKSRYLNLELNNXSALRAGAFAAMPSLANLRLSFNQIXSLDGG
ILAGTRNLRHLYLASNNIXEIVSGAFRGNNQLKSLDLSGNKLTEIRSDTFDGLLYLERLN
LRSNNIEHIDDGSFEMMPSLRELDISINGMKTLSRGMFMGLVNMNYFFMSFNRLGETAAL
PKSTDAYQRLVEGLSILCRKRGLHFSDLRGNGLGDFMQDVDAMQLGFDFTDPEQHRCML
Nucleotide sequence
Length: 1,530
>Boleac.CG.SB_v3.S765.g13969.01.t
TTAAGGTTTCGTACAGTTGTCTCCTGTAGATATCATAGGCTTAGTGTTCCAGTTGATTAA
AATGGAATTTATCGAAAGATTTATTGTGACTGCCATACTGATGACAGCTACTTCATTTGC
ATCAGAAACGTCATGTAAACGGTTTGAAACAACTCCTTTCTTTGTGAAAAAGTCACTCGG
TTATTCCAAACTCGTTAGGATCCGGTGTGATGAGAAAAAAGTGCCATATTTGACGTCTGA
CTTCATTTACGAGACGGTAATCGGGCCGCCTGCACCAATTAAAGGCATGTAACCAAGTAA
TTATTCTGAGGGAGCTCTGCATGACAATCCAGTAGTAGAAACACCAACNCCCAAATTCCA
ACTTACGCTACAGAACGCAGAATTAGAAACAATCCAGGATGGCGCGTTTCATGCTGTTCC
GACATTGGAGGCAACATTTGTACAACAGTTGCTGAATCTTCGTAAGAACAAGTTGAAAGA
AATTCGTAAAAGAACATTCGAGGGCTTANTAGGCTTGAAAGATTTGGACGTGGGACGAAA
TGACATAAAGAAAGTGGAACCATTTTCATTCTCCCAACAACGAGAGCTGATTTACTTGAG
CATGTCAGAAAATAATTTGAAGGAATTGAACTATTTCACATTCAGAGGTTTGTTCAAGTC
GCGATATCTGAATTTGGAATTGAACAACATNTCAGCGTTGCGCGCCGGAGCGTTTGCTGC
CATGCCCAGCTTGGCGAATCTGCGATTATCTTTCAATCAAATAANAAGCCTGGATGGTGG
AATCCTTGCCGGAACACGCAATTTGCGGCATTTGTATTTGGCATCAAACAATATTGANGA
AATCGTGAGTGGTGCTTTCAGAGGAAATAATCAATTGAAATCTCTGGATTTATCAGGGAA
CAAACTAACGGAGATCAGGTCTGATACGTTCGATGGTCTTCTCTATTTGGAGCGATTAAA
TCTCCGAAGCAACAACATTGAGCACATTGACGATGGGTCGTTCGAAATGATGCCTTCACT
GCGAGAGTTGGATATTTCCATCAACGGCATGAAAACATTATCTCGGGGAATGTTTATGGG
ATTGGTGAATATGAACTATTTCTTCATGTCATTCAATCGTCTTGGAGAGACGGCTGCGTT
ACCAAAGAGCACGGACGCATATCAGCGNTTGGTTGAAGGGTTGTCAATTTTGTGTCGGAA
ACGTGGACTGCATTTTTCTGATCTGCGGGGCAACGGACTTGGGGACTTTATGCAAGACGT
TGATGCAATGCAACTAGGATTTGACTTCACCGATCCAGAGCAGCATCGTTGCATGTTATG
ATGCTTATAGCCTCTACCAATGAGAAAGTGAGCACCCGATTGAGCTGTCCGGCCAACCAT
ATATCGCCTACTGGGTCAAACAGCGAGGCGGCAGNCTTTTCTCCGATCGTTCAGACGATA
CTTCATTCAAATCAATTTGCTTCAATACATAAATATTTTGTTCATCGTGCAATTTTTTCC
AATGGGTTTCACCAGCAGAACCTGTCCTGC
| Gene3D |
LRR_dom_sf (IPR032675) - T[1-96] 3.9E-20 - T[97-222] 3.7E-21 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[41-64] 0.95 - T[65-88] 2.0 - T[91-112] 0.86 - T[113-136] 1.7 - T[137-160] 4.7 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[42-102] 1.4E-14 - T[116-174] 1.6E-14 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[43-64] 6.295 - T[67-88] 7.281 - T[91-112] 7.789 - T[115-136] 7.581 - T[139-160] 5.433 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRIG2_HUMAN | 33.333 % | 91.3 | 5.07E-21 |
| CHAD_HUMAN | 33.146 % | 86.3 | 1.15E-19 |
| LRRT1_HUMAN | 36.735 % | 89 | 2.18E-20 |