- Transcript 'Boleac.CG.SB_v3.S712...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S712.g13477.01.t
Possible name(s)
IGFALS; LRRC15; TRIL
Gene model
Location
S712 [10,469 / 17,954]
Amino acid sequence
Length: 652
>Boleac.CG.SB_v3.S712.g13477.01.p
MEKLLGRHYVIFLAMYLMQTCKGQSLDQESLNELQRRKSSLDKERFPSCMRDDKNNATLW
CDKSRYNSTLDLTIDRKVSSIFSISSEIRTLXVNDSCLQTLNQGDLAHFDHLTTLVAENN
FLTILKTGIFSDNPDLEEINLSRNEIQSIQDGTFEGLALLLHLDLGGNSIDEISQELFTD
LNSLEYLSLARNQIQLIPKRVFISLMKLTILKLEGNRISQIHKNGFDELSELEXLDLSNN
KIQEIKSRTFHSLTKLRKLNLRGNQINTYPSDLMVYTLNLEFLDLGSNHLHNLANETFSN
LRQLRILKIDHNSLTRIGKSHFYDNENLELLNLSANALQDISANAFSNNRILSTLLLQSN
HLHKPEVDWFAYIESETDISGKVNLSDNEWWCDCTTRLFQQFMLKATRKNPIFSQQLDIH
CSSNKEYEGRLSELDIFCPSDNSNSPIILKSSAQTSLKTSLSTKPALIGILLDLPKINDP
SEDVVTDNISTSSPATPTRLPTSKTRHTLILAVSSKTDEFDTTSGGVSISMGAIVAFGVV
LIVIFGGVLFLCKKSNGHNLRMWVSTRRDRYSSRQPFLEEIKVDHYDGRLPEPFSGSDDE
DITFTRSPTQVRGHLKQLDTYQTVDEETFYTPRTTPRPTPKMAKQKPAETST
Nucleotide sequence
Length: 2,000
>Boleac.CG.SB_v3.S712.g13477.01.t
AAAAAACATATATATCATTCTACCGTAGTTTATTTTGCAAAATGGAGAAATTGTTGGGAA
GGCACTACGTGATTTTTTTAGCAATGTACTTGATGCAAACTTGTAAAGGTCAAAGTCTTG
ATCAAGAATCATTGAATGAGCTACAACGGCGAAAATCTAGTTTGGATAAAGAGAGATTTC
CTTCTTGTATGAGAGATGATAAAAACAATGCAACTCTGTGGTGCGACAAATCGCGCTACA
ATAGTACTTTGGATTTGACAATCGATAGGAAAGTATCATCAATCTTTTCCATATCCAGTG
AGATACGAACTCTANTGGTCAACGACAGTTGCTTGCAAACTTTGAATCAAGGCGACCTCG
CACATTTTGATCATTTAACCACACTTGTAGCAGAGAATAATTTCCTCACTATCCTCAAAA
CCGGCATTTTTTCGGACAATCCAGATCTAGAAGAAATAAATCTATCACGAAACGAAATTC
AATCGATTCAAGATGGAACGTTTGAAGGGCTGGCACTTCTTTTGCATTTGGATCTTGGTG
GAAATAGCATCGATGAAATATCACAGGAGCTGTTCACAGATTTGAACAGTTTGGAGTATT
TGTCGTTGGCGCGAAATCAAATTCAATTGATTCCAAAAAGAGTATTTATCTCTCTCATGA
AACTCACGATACTAAAACTAGAAGGCAATAGGATATCTCAGATTCATAAGAATGGATTCG
ATGAGTTGAGCGAATTGGAAGANTTAGATCTGAGCAATAACAAGATTCAAGAAATCAAAT
CGAGAACATTTCACTCGTTGACAAAATTGCGAAAGTTGAATTTAAGAGGAAACCAAATAA
ATACTTATCCCAGCGATTTGATGGTGTATACATTGAATCTTGAATTTCTTGACCTTGGAT
CAAATCATCTACACAATCTCGCGAACGAGACCTTTAGTAATTTGCGTCAATTAAGGATTT
TGAAGATTGACCACAACTCCCTGACCAGAATTGGAAAATCTCATTTTTATGACAACGAAA
ATCTAGAACTTCTGAATCTCAGCGCCAATGCGTTGCAAGATATATCCGCAAATGCATTTT
CCAACAATCGGATCCTATCAACACTTCTGCTACAATCTAACCACTTACATAAGCCAGAGG
TTGATTGGTTTGCTTATATAGAATCAGAGACAGATATTAGCGGGAAAGTCAATCTGAGTG
ATAATGAATGGTGGTGTGATTGCACCACGAGACTATTTCAACAATTCATGTTGAAAGCAA
CAAGAAAGAATCCAATCTTCTCGCAACAGCTTGATATACACTGCAGTAGCAACAAAGAAT
ACGAAGGGCGACTTAGCGAGTTGGACATCTTCTGCCCGTCCGATAACTCAAATTCACCCA
TCATCTTAAAATCCAGCGCTCAAACGTCTCTAAAAACGTCCTTATCAACAAAACCTGCTT
TGATTGGCATTCTACTCGATTTACCGAAAATAAACGATCCTTCTGAAGATGTCGTGACAG
ACAACATTTCTACGTCATCACCGGCTACGCCGACGAGGTTACCTACGTCAAAAACAAGAC
ACACCCTTATTCTCGCTGTTTCCAGCAAAACAGATGAGTTCGATACAACATCAGGAGGTG
TTTCCATTTCGATGGGAGCGATCGTAGCTTTCGGGGTGGTACTTATTGTTATATTTGGAG
GAGTACTTTTTCTTTGTAAAAAATCGAACGGACATAACCTGCGTATGTGGGTGTCAACTA
GACGAGATCGGTACTCATCTCGCCAGCCGTTCCTGGAAGAAATCAAAGTCGACCACTACG
ATGGAAGGTTACCAGAACCATTCAGCGGCTCAGACGATGAAGATATTACCTTCACGCGAT
CCCCTACTCAAGTTCGTGGCCACTTGAAACAACTCGATACATATCAAACTGTTGACGAAG
AGACCTTTTACACTCCTAGAACAACGCCTCGGCCAACACCTAAAATGGCAAAACAAAAAC
CCGCGGAAACGTCGACATGA
| Gene3D |
LRR_dom_sf (IPR032675) - T[49-166] 1.6E-14 - T[167-434] 9.6E-53 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[109-132] 65.0 - T[134-156] 5.2 - T[157-180] 0.77 - T[181-204] 0.17 - T[205-228] 7.8 - T[229-252] 0.0014 - T[253-276] 6.6 - T[279-300] 20.0 - T[301-324] 25.0 - T[326-348] 8.5 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[111-170] 1.7E-12 - T[207-266] 2.4E-15 - T[302-362] 3.8E-12 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[135-156] 7.188 - T[159-180] 6.403 - T[183-204] 6.434 - T[207-228] 6.226 - T[231-252] 8.097 - T[255-276] 6.387 - T[279-300] 7.735 - T[303-324] 6.01 - T[327-348] 7.381 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ALS_HUMAN | 29.607 % | 120 | 1.62E-28 |
| LRC15_HUMAN | 32.746 % | 124 | 9.37E-30 |
| TRIL_HUMAN | 30.24 % | 114 | 3.03E-26 |