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  1. Transcript 'KH2012:KH.C2.216.v1....'
  2. Transcript 'KH2012:KH.C2.216.v1....'
  3. Transcript 'Boleac.CG.SB_v3.S6.g...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S6.g12164.01.t

Possible name(s)

NOL10; WDR83

Location

S6 [392,020 / 400,913]

Sequences

Amino acid sequence

Length: 656

>Boleac.CG.SB_v3.S6.g12164.01.p
MQVTSPNNVNIYNLSQGKSLPEFLSDAKKRALLKKDVALRRRIELIQDFSMPTVSTRVKV
TPDGNYIFAAGTYKPRIKCFDVNNLSLKFERCLDAEEDYSKIVMMLNDRYIEFHSQEGRW
YRIRMPKFGRDLRYHPGNCDLFLVGAGPEIYRLNLSHGQFFKSFVTDAKEINVCDLNKEH
HLLAVGTTDGKVECWDPRSKQRVGVLDCAVNVASMNNDMCECPEITALKFKGPLKMSVGT
DKGQILLYDIRTNKPYITKDHYYDLPIHSIAFNEENKVVISSDQRCVKLWEENTGAAVTA
VEPEHDINDMHIIQDTGLMFLASESVKIQTFFIPMLGPAPKWASFLDSLTEELEENPIQE
LYDDFKFVTMKELESLAYMHGYFMDMRLYHKAKSIANPFAYSEYRKKKIQEKIEEARANR
VQIKKLPKVNKNLAEKLISHSTDSELKSGKKKKQKKEAESLLGDDRFKAMFENPEFEINE
ESEEFQLLNPVITKKFEKIRKKVTEEVNGESDKEESEPEGKGSEDSSEDEGTTRWIKHKV
KKATKQDQGRNGGTKMYQLKTDQEFYTLKDLNKVKKDELREKQKIMKISIEDRIKSGATN
KKVVRNESCTETSFKTRKPDKQVQRDQEQKKHREERRKVRRNAMKLPKIKQKSMFQ

Nucleotide sequence

Length: 2,740

>Boleac.CG.SB_v3.S6.g12164.01.t
CAGTAGCCCATGGTTTTAACAGAACTTCACTTTCTCATTCACCGGCACTGTACGGTATTT
TTGAAAAGCCTGCTGCTCCACTGATTACTGAACATCATGCAAGTGACAAGTCCTAATAAT
GTGAATATCTACAACTTGAGTCAAGGAAAGTCATTGCCTGAGTTCTTGTCAGACGCCAAG
AAAAGAGCTCTGTTGAAAAAAGATGTTGCATTACGAAGAAGGATAGAGCTTATACAAGAT
TTCTCGATGCCTACTGTGAGCACAAGAGTTAAAGTCACACCTGATGGAAATTATATTTTT
GCTGCAGGGACATACAAGCCTCGTATCAAATGCTTCGATGTGAATAATCTGTCTTTAAAA
TTTGAAAGGTGCCTTGATGCTGAAGAAGATTACAGCAAGATAGTCATGATGTTAAATGAT
CGTTATATAGAGTTTCATTCTCAAGAAGGACGTTGGTACCGTATTAGAATGCCTAAGTTC
GGTCGTGATTTGCGTTATCATCCAGGAAATTGTGATCTTTTTCTTGTTGGAGCCGGACCT
GAAATCTACCGTCTCAACCTGAGTCATGGACAATTCTTCAAATCTTTTGTTACTGATGCC
AAAGAAATCAACGTTTGTGACCTTAACAAAGAACACCATTTGCTCGCTGTGGGTACAACT
GACGGCAAGGTAGAGTGCTGGGACCCAAGATCAAAGCAAAGGGTTGGCGTTCTTGATTGT
GCAGTCAATGTCGCGAGTATGAACAATGATATGTGTGAATGTCCTGAGATCACGGCTTTG
AAATTCAAGGGACCGTTGAAGATGTCCGTTGGGACTGACAAGGGGCAGATTCTTCTGTAT
GACATTCGTACTAATAAACCATATATCACAAAGGATCATTATTATGATCTTCCTATTCAC
TCAATAGCTTTCAATGAAGAGAATAAAGTTGTGATTTCGTCCGATCAACGTTGTGTTAAA
TTGTGGGAAGAGAATACCGGTGCTGCCGTCACAGCGGTTGAGCCTGAACATGATATCAAT
GACATGCACATCATACAGGATACTGGGCTCATGTTTCTTGCAAGTGAAAGTGTCAAAATT
CAAACGTTTTTCATTCCGATGCTCGGTCCAGCGCCGAAATGGGCTTCGTTTCTAGACAGC
CTGACAGAAGAGCTTGAAGAAAATCCCATTCAAGAGTTGTACGATGATTTCAAATTTGTT
ACCATGAAAGAATTGGAAAGCCTAGCTTACATGCATGGATACTTCATGGATATGCGTCTA
TATCACAAAGCCAAGTCCATTGCCAATCCTTTCGCGTACAGTGAATATAGAAAGAAGAAA
ATTCAAGAGAAAATCGAGGAAGCAAGAGCAAATCGTGTCCAAATCAAGAAATTACCGAAA
GTCAATAAAAATCTTGCGGAGAAATTGATCAGCCATTCAACGGACTCTGAGCTTAAGAGC
GGCAAAAAGAAAAAACAGAAGAAAGAAGCTGAGTCTTTACTTGGCGATGATCGATTCAAA
GCGATGTTTGAAAATCCAGAATTTGAAATCAATGAAGAATCTGAAGAATTTCAACTTCTT
AACCCGGTCATAACCAAAAAGTTTGAAAAAATCAGAAAAAAGGTTACTGAAGAGGTTAAC
GGCGAATCGGATAAGGAAGAGAGCGAGCCGGAAGGAAAAGGATCTGAGGACTCTTCGGAA
GATGAGGGAACAACACGATGGATCAAACATAAAGTAAAGAAAGCGACAAAGCAGGATCAA
GGAAGAAACGGTGGGACTAAAATGTACCAGCTCAAGACGGATCAGGAATTTTACACTTTG
AAAGATTTGAATAAAGTTAAAAAAGACGAACTTCGGGAAAAACAGAAAATTATGAAGATT
AGCATTGAGGATCGAATTAAAAGTGGCGCTACTAATAAGAAAGTAGTCCGGAATGAAAGC
TGCACTGAAACATCATTTAAAACCAGAAAGCCCGATAAACAAGTTCAAAGAGACCAGGAA
CAGAAAAAGCATCGTGAGGAGAGGAGGAAAGTCAGACGGAATGCGATGAAACTGCCCAAA
ATTAAGCAAAAATCCATGTTTCAATGAAATGTCAAGGTGCTGGCAATCTATTCGTGGTAG
GGCCTATCATGATCAGAAGTTCTGCTCTGTGGGTACTGAGCACTGAGCAGTGGTGCTACC
ATCAGCACCAGGTAGTCACGCCTTGGATTCTGAAAGATATTTTCAGTTTTGTGGTAAACA
ATAACCTTTATCTCCACACTATGGCATTGGCATAGGCTTATAAGTTACCTACGAAGATGA
GGAATAATTTGAAGTTAGGGGCCTTTTGTGCTGAAGAAAATTGTTAATGCAGAGTAAGTA
AAGACACTTCTGAGGTTCCGGCTGAATGGTGAATGTGGCATCAAGCATCGTGCAGACCAC
AAACACTAAGGAGATCAAGCCTTTGAACTGATATGCCTAATGCGATCGTGGTCGACGGCA
CTCGATCCACGCTGTGCTCGTATGTCTTCGATTTAGTGCTGGATTTGTTCGAGGATCTGG
GCGGCTTTTCCAACACGTGCTTCACTGCATTCAAATGAGGTCGAATTTGTAGACGGATAG
CAGTTTTTAATACAGTACTTCGAGCAATTCATTCACTTTGCAGCTGCCTAGTTTTTGGTG
ACCGCAATTTCCCGCGTTGCGAGACCGTTTTGGTACTAGTCTATATATTTTACTCTGGTA
GTCTGATATTTATGCAATATACGCATCTTGGTGAATTGGC

InterProScan

SMART
WD40_repeat (IPR001680) - T[42-81] 320.0 - T[157-196] 0.19 - T[252-291] 5.5
Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[50-332] 3.5E-19
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[56-97] 2.04E-27 - T[129-325] 2.04E-27
Pfam
NUC153 (IPR012580) - T[464-491] 7.7E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NOL10_HUMAN 49.345 % 651 0