- Clone 'AHC0AAA154YP14' >
- Transcript 'KH2012:KH.C2.322.v2....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.S988.1.v2....' >
- Transcript 'Boleac.CG.SB_v3.S623...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S623.g12506.01.t
Possible name(s)
HERC2; RCBTB1; RCBTB2
Gene model
Location
S623 [52,455 / 59,326]
Amino acid sequence
Length: 544
>Boleac.CG.SB_v3.S623.g12506.01.p
MEQKLGESDVTINVVDPSVSVLPTKRCVERVWKTDDTNLWPVLNLVEPELRAKIKLVHVF
SQVAAEVIFVTTDDKVYAMGTNTSGCLGVGDSRSSLTPRCIEALSGQKVIDIATGSGPHV
VVLTQDGSVYNWGHNSYMQIGNGSSAPVSTPLSRNLSNRVIKIACGSHHSLALTNEGEVF
AWGYNNCGQIGSGSTTNQTTARKVTACIGSKRIVDIACGSSSSFAVTEDGEVFSWGYNGN
GQLGVGNNVNQSNPCRIXALQNVVIVQVVCGYAHALALSDDGILYGWGANSYGQLGSGNK
ANTVTPIQVATEVGRTVLVAASHYSHSCAAQNQIGQVFMWGQLRMQSSSRPILTNFSSVA
AVFAGFSSPPQSISSAFNDESTSDLKIIADGKVIHVHRAILKIRCEYFRRMFQSHWDESS
QDKVEIIGYSFPVVHSFLKWLYTDILELPPEDAIGLLDLATSYCELGLKQQCEKLIREGI
TVENSAILFAAAIKYHAKDLEDYCLQYCLNHTSDVIKTDNFQALTLDVMRRFITEAAKRG
AFKR
Nucleotide sequence
Length: 2,160
>Boleac.CG.SB_v3.S623.g12506.01.t
GAGACTGTTGAAAGTGCCGCTACGGTCACTTTTGGGCTAATGGTNCAACTTTTTGAACAT
TGCAGCTAAACTACCGGTATATAATTTGTCATTTTGGTCATTCTCGTACCTCGTACAGAC
GTTTGCCATTCCAATTAGATAATTTTGTAAGGATGGAACAGAAGCTTGGTGAATCTGATG
TGACGATTAATGTTGTTGATCCTTCCGTGTCCGTGTTGCCAACAAAACGCTGTGTTGAAC
GTGTATGGAAGACGGATGATACAAATTTGTGGCCTGTCCTAAACCTCGTCGAGCCGGAAC
TTCGTGCAAAAATCAAGCTGGTTCATGTTTTCAGTCAAGTAGCTGCTGAAGTTATTTTTG
TTACAACGGACGATAAGGTCTATGCCATGGGAACAAACACAAGTGGGTGTCTTGGGGTCG
GTGACTCTCGCAGCTCTCTAACACCAAGATGTATTGAAGCTCTCTCTGGCCAGAAGGTCA
TCGACATAGCAACTGGAAGTGGTCCTCATGTTGTTGTCCTCACTCAAGATGGATCAGTAT
ATAATTGGGGTCACAATTCTTACATGCAAATCGGCAACGGAAGTTCTGCTCCAGTGTCGA
CCCCTTTGTCACGGAATCTGAGTAACCGAGTGATCAAGATTGCCTGCGGAAGCCACCACT
CGCTGGCGCTCACAAATGAAGGAGAGGTGTTCGCTTGGGGTTACAACAATTGTGGCCAGA
TTGGCTCTGGCTCAACTACCAACCAGACGACGGCCAGAAAAGTAACAGCTTGTATCGGTA
GTAAACGGATTGTCGACATTGCATGCGGATCGTCTTCATCCTTTGCGGTAACTGAAGACG
GGGAAGTCTTCTCATGGGGCTACAATGGAAATGGACAACTTGGTGTTGGTAACAATGTCA
ATCAATCGAACCCATGTCGAATTNCNGCACTCCAGAATGTTGTGATTGTTCAGGTTGTTT
GCGGGTACGCTCACGCTCTAGCACTTTCTGATGACGGTATTCTGTATGGCTGGGGAGCAA
ATAGCTATGGGCAGCTCGGATCTGGAAACAAGGCAAACACAGTCACTCCCATACAAGTGG
CAACTGAAGTTGGTCGTACCGTGCTTGTAGCTGCGTCTCATTACTCTCATTCGTGCGCTG
CTCAAAATCAAATTGGACAGGTCTTCATGTGGGGCCAACTTCGCATGCAATCGAGTTCTC
GTCCTATACTGACAAATTTCTCATCTGTGGCTGCAGTCTTCGCTGGATTCAGCTCTCCTC
CGCAAAGTATTTCCTCCGCATTCAATGATGAGTCAACCTCTGACCTAAAGATTATTGCCG
ACGGGAAAGTGATCCATGTGCATCGTGCTATTCTTAAAATCAGATGCGAATACTTCCGAC
GTATGTTTCAATCTCACTGGGATGAAAGTAGTCAGGACAAGGTTGAAATTATTGGATACT
CATTTCCAGTAGTTCATTCNTTCTTGAAATGGCTCTACACCGACATTTTAGAGCTCCCTC
CGGAGGATGCAATTGGCCTTCTAGATCTGGCAACTTCGTATTGTGAGTTGGGTCTAAAAC
AGCAGTGCGAGAAGCTTATCAGAGAGGGCATCACGGTGGAAAATTCAGCAATACTATTCG
CAGCTGCAATCAAGTACCATGCCAAGGACCTTGAGGACTACTGTTTACAATACTGCCTCA
ACCACACGTCAGATGTCATAAAGACTGACAACTTCCAGGCTCTTACACTCGACGTTATGC
GACGCTTCATTACGGAGGCAGCTAAACGTGGTGCATTCAAGCGCTAAACCCAAAACTTAT
TTTTTGAAATTTGAAGTACGGCGCCAGTTTTTTGAGTGCTTGTGATCGGCACCGTTTTTT
GCATCAATCCAGATGTTCCAACGGTCAAATGCTGCCATAGGCAACCGCAGTGCACGAAAA
CACGCATCATGAACATTATACCATACCTAATGAAGTCTCACCCATCCATGAACAAATGGG
AGATATTTCATTTGAGGCGATGGCCTTCCTGCACTCCTGACAAGGATCGGATATTTATGT
TTACAATTTCTATTGCTGCTCACACTGTGTCCACCGATGCACTTGTGTATTTTAGGAGTT
GGGAATGGATCGAATGTATTTACTCGCATNTGGTATTTTGATTCCGTTTCTTATAAATCC
| Gene3D |
RCC1/BLIP-II (IPR009091) - T[46-154] 4.4E-25 - T[155-368] 1.9E-59 |
| SUPERFAMILY |
RCC1/BLIP-II (IPR009091) - T[68-342] 1.92E-81 |
| Pfam |
Reg_chr_condens (IPR000408) - T[73-116] 5.1E-9 - T[229-278] 4.3E-14 - T[281-329] 2.5E-9 |
| ProSiteProfiles |
Reg_chr_condens (IPR000408) - T[74-125] 11.007 - T[127-176] 15.529 - T[177-229] 13.861 - T[230-281] 17.398 - T[282-333] 11.268 |
| PRINTS |
Reg_chr_condens (IPR000408) - T[128-144] 1.5E-12 - T[160-173] 1.5E-12 - T[179-195] 1.5E-12 - T[230-246] 1.5E-12 - T[268-284] 1.5E-12 - T[284-298] 1.5E-12 |
| ProSitePatterns |
Reg_chr_condens (IPR000408) - T[163-173] . |
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[371-477] 5.76E-24 |
| Pfam |
BTB/POZ_dom (IPR000210) - T[376-477] 7.4E-19 |
| ProSiteProfiles |
BTB/POZ_dom (IPR000210) - T[383-450] 16.921 |
| SMART |
BTB/POZ_dom (IPR000210) - T[383-480] 6.3E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HERC2_HUMAN | 36.331 % | 162 | 3.38E-42 |
| RCBT2_HUMAN | 46.893 % | 524 | 0 |
| RCBT1_HUMAN | 51.418 % | 582 | 0 |