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  1. Transcript 'Boleac.CG.SB_v3.S60....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S60.g12189.01.t

Possible name(s)

CEP78; NLRC3; NLRP2

Gene model

Boleac.CG.SB_v3.S60.g12189

Location

S60 [3,263 / 7,115]

Sequences

Amino acid sequence

Length: 631

>Boleac.CG.SB_v3.S60.g12189.01.p
MASTPESVAIRHRGGYDFQTHYCSLCSLQDTVPLLEVKAHIGQGVLDINADKIRLADWTP
ILNTLRINKNLRFIAVRSYYAQSVSKDDPKKSHYFKRRSPAIIEKDLTLRLAQAIAECLK
QTECLKCLDLQGVPFRLKDLKVLSKGFERNSTLTHVSLEYCHIRDDGCENITASLRHHPA
LTHINFTGCSLTRNSADTIAKLIKHQSTERHSEAWADSLRYRQPNLNNMTGLRRITLNHN
PMIGDEGIHLISDVLKDDLWLKAIDLQKCGVGRDGASALLETLSQNKTLLVVDVRFNPLI
DRNLLHSVIGQVLINSNGXDDKEFPWIKCEAPKDPYRTRPRRRGRQIRSLYGRKAAVRPI
IKSSRVHSSPSHGNPGTEGFVPWRTAHRASHYKKAYNEGEMVGTPRYLQNPEGYQVSVQE
ETASSSEDEEQPIKTSDLKSLEVPALQISQMQSGRSDKSKSPAHTIRNLEVELVHAQRVI
AEQRNARHLTEQRAMNLEIENIRLKKQLEEAQEASRIRSTLDDDELLDSMEASFNKFHEF
LELLDKLGLGGLAAYAGVSSIKFPLPGNSTPRHQRAPNVNREPRKKSASGISPDLSNSDD
DAVIPPPITIQNRTVVDEAGDAGVGGNKTSK

Nucleotide sequence

Length: 1,908

>Boleac.CG.SB_v3.S60.g12189.01.t
TTTAATGTTTCAATGGCCTCAACCCCAGAAAGCGTTGCTATAAGACATCGCGGTGGTTAT
GATTTTCAGACTCACTACTGCAGCTTGTGCTCATTGCAAGACACTGTTCCACTCTTGGAG
GTTAAAGCTCATATTGGTCAAGGTGTCCTTGATATTAATGCAGATAAGATTCGTCTTGCT
GACTGGACACCTATTCTGAACACACTACGCATCAACAAGAACTTACGATTCATTGCTGTT
CGCAGTTATTATGCGCAATCTGTCAGCAAGGATGATCCCAAGAAGTCTCACTATTTCAAA
CGACGATCGCCTGCCATTATCGAAAAAGACTTAACATTACGACTGGCACAGGCAATTGCA
GAGTGTTTGAAGCAGACTGAATGCTTGAAATGTCTAGATTTACAAGGTGTACCATTCAGA
CTCAAAGACCTAAAAGTTCTGTCAAAAGGCTTCGAAAGAAATTCTACTCTGACTCATGTT
TCGTTGGAGTATTGCCACATTCGCGACGATGGCTGTGAAAACATCACCGCCTCATTGAGA
CATCATCCTGCATTAACTCATATCAACTTCACTGGATGTAGTCTGACCAGGAACAGTGCA
GATACTATTGCTAAACTAATCAAACATCAGTCAACTGAAAGGCACAGTGAAGCTTGGGCT
GACAGTTTGAGGTATCGACAACCAAATTTGAATAACATGACCGGATTGAGGAGAATTACT
CTGAATCATAATCCAATGATCGGTGATGAGGGAATTCACTTGATATCTGATGTGTTGAAA
GATGATTTATGGCTCAAAGCTATCGATCTTCAGAAGTGTGGAGTTGGAAGAGACGGTGCA
AGCGCTTTGCTTGAAACGCTGTCACAAAATAAAACTCTCCTTGTGGTAGATGTGCGGTTC
AATCCACTGATTGATAGGAATTTGCTGCACTCTGTAATCGGGCAAGTCTTGATAAACTCA
AATGGATNTGATGATAAAGAGTTTCCTTGGATTAAATGTGAAGCACCTAAAGATCCTTAT
CGCACGAGACCTCGTCGAAGAGGGAGACAAATACGAAGCTTGTATGGTCGAAAAGCAGCA
GTCAGACCAATCATCAAATCATCAAGAGTTCATTCAAGTCCTTCACATGGTAATCCTGGT
ACTGAAGGATTTGTTCCATGGAGAACTGCACACCGGGCATCTCATTATAAAAAAGCATAT
AATGAAGGAGAGATGGTCGGCACACCAAGATATCTTCAAAATCCTGAGGGGTATCAAGTC
TCCGTTCAAGAAGAGACAGCCTCATCCAGTGAAGATGAAGAGCAACCAATCAAGACTTCT
GATTTAAAGTCTCTGGAAGTGCCTGCTCTTCAGATATCGCAAATGCAGTCTGGTAGAAGT
GACAAGTCTAAATCTCCCGCCCATACTATTAGAAACCTTGAGGTGGAGTTGGTTCATGCT
CAAAGAGTGATAGCAGAACAAAGGAATGCAAGACATCTCACCGAGCAAAGAGCAATGAAC
TTGGAGATTGAAAATATAAGATTGAAAAAGCAATTGGAGGAAGCACAAGAAGCAAGTCGC
ATCCGATCTACACTTGATGATGACGAATTGCTTGATAGCATGGAAGCATCATTTAACAAA
TTTCATGAATTTTTGGAATTACTGGATAAACTTGGTCTTGGTGGTCTTGCTGCTTACGCT
GGAGTTTCCTCAATCAAATTTCCTCTTCCTGGAAACAGCACTCCCCGACATCAACGTGCT
CCAAATGTCAACAGAGAGCCAAGGAAAAAGTCAGCCTCTGGAATATCACCAGACTTATCT
AATAGTGATGATGATGCAGTGATACCACCACCTATAACCATCCAGAACCGAACGGTTGTA
GACGAGGCGGGTGATGCCGGGGTCGGAGGTAATAAAACTTCGAAGTAA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[18-221] 9.7E-21 - T[223-308] 4.1E-12
Pfam
Leu-rich_rpt (IPR001611) - T[150-170] 0.0064
PRINTS
Cep78 (IPR026212) - T[168-189] 1.8E-18 - T[191-206] 1.8E-18 - T[215-233] 1.8E-18 - T[253-272] 1.8E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CEP78_HUMAN 38.748 % 374 6.01E-121