- EST 'FF693316.1' >
- EST 'FF721091.1' >
- Transcript 'KH2012:KH.C9.38.v3.A...' >
- Transcript 'KH2012:KH.C10.166.v1...' >
- Transcript 'Boleac.CG.SB_v3.S5.g...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S5.g10716.01.t
Possible name(s)
TP53; TP63; TP73
Gene model
Location
S5 [67,309 / 77,461]
Amino acid sequence
Length: 530
>Boleac.CG.SB_v3.S5.g10716.01.p
MSHDHNNIPQDPQQIFSSDNTGNVWNPDFDEGRHGGFPFPTLLDTADLNDSMPRNFHGQQ
PPAMALCPPYPQSNRRYSSVQLGEDDVFTTGQSFNQNQVPVPDQSLMTYSTCIMDQQYQQ
NNQPTQGNMHIPEQNNYDGYMHSASPDTASISNSPYTPTIRQDFSVSPTGNQPVPNVKGS
AIPCVSDYAGENSFEMHFANQTESAVKSAQYTYSSILRKLFVKRGVLCPIQFRCLKQPPL
GSYIRALPVYVKPEDVTEVVSRCPNHHLQDRNSDHLANYLVRAEQPGNNTVRYIXAQDGR
ESVTINYTPPEVGSDYITVFYSYMCLSSXVGGINRRPIMTIFTLESPDGSILGRQCVEVR
VCCCPGRDRAQEERRKRKPNAGPVLTVDLFYHKLLALPVYVKPEDVTEVVSRCPNHHLQD
RNSDHLANYLVRAEQPGNNTVRYIKAQDGRESVTINYTPPEEFLXRIKGKENFEILKKIK
EALELKELISKEQREQYQQREATAQESAMKQILSNYFXKGDGDDSGPFPT
Nucleotide sequence
Length: 4,049
>Boleac.CG.SB_v3.S5.g10716.01.t
CTGAGGTAAACCGGTTTACCTCAGTTATCTATAATCACACTTNTAGTAAGGTTTCGTTGC
TGTGGTCAATAAAATGTCACACGATCATAATAATATTCCACAAGACCCCCAGCAGATCTT
CAGCAGTGATAACACCGGTAATGTGTGGAATCCGGACTTTGATGAAGGGAGACATGGCGG
GTTTCCTTTTCCGACTCTTCTTGATACTGCGGATTTAAATGATAGTATGCCAAGAAACTT
TCATGGCCAGCAACCACCAGCCATGGCGCTTTGCCCGCCATACCCACAGTCTAATAGGAG
GTATTCAAGTGTTCAGCTGGGCGAAGATGATGTTTTTACTACTGGACAGTCATTTAACCA
AAACCAAGTACCGGTACCTGACCAGTCATTGATGACATATTCTACTTGCATTATGGATCA
GCAATATCAACAAAACAATCAACCGACCCAAGGCAATATGCATATTCCAGAACAAAACAA
CTATGATGGCTATATGCATTCTGCAAGTCCTGACACTGCCAGTATTTCAAACAGCCCATA
CACACCTACCATTCGTCAGGATTTCTCTGTTTCTCCTACCGGTAATCAACCAGTGCCCAA
TGTGAAAGGCAGCGCGATACCTTGTGTGTCTGATTATGCCGGTGAAAACAGCTTTGAGAT
GCATTTTGCTAACCAGACCGAATCAGCCGTCAAAAGTGCCCAGTACACTTACTCGAGTAT
CCTCAGAAAATTGTTTGTGAAAAGGGGTGTGTTGTGTCCAATACAGTTCCGCTGTTTGAA
GCAGCCACCATTGGGCAGTTACATCAGGGCATTGCCAGTTTACGTAAAACCTGAGGATGT
TACCGAAGTGGTTTCAAGATGTCCNAATCATCATCTCCAAGACAGAAATAGTGATCACCT
TGCAAATTATCTAGTGCGAGCAGAACAACCAGGAAATAACACTGTACGATATATAANGGC
ACAAGATGGCAGAGAAAGTGTCACGATCAACTACACTCCACCTGAGGTCGGATCGGATTA
CATCACGGTTTTCTACTCTTACATGTGTCTCTCGAGCTGNGTTGGNGGTATCAACAGACG
TCCCATCATGACAATATTCACATTGGAGTCTCCGGACGGAAGCATACTCGGTAGACAATG
TGTTGAAGTTAGAGTGTGCTGTTGCCCGGGCCGAGATAGAGCTCAGGAGGAGCGACGAAA
ACGAAAACCTAACGCAGGACCTGTCTTGACGGTTGATTTATTTTACCACAAGCTACTGGC
ATTGCCAGTTTACGTAAAACCTGAGGATGTTACCGAAGTGGTTTCAAGATGTCCAAATCA
TCATCTCCAAGACAGAAATAGTGATCACCTTGCAAATTATCTAGTGCGAGCAGAACAACC
AGGAAATAACACTGTACGATATATAAAGGCACAAGATGGCAGAGAAAGTGTCACGATCAA
CTACACTCCACCTGAGGAATTTTTATTNCGNATTAAAGGGAAAGAAAACTTTGAAATTCT
CAAGAAGATTAAAGAGGCTTTGGAGTTGAAGGAGCTAATCAGCAAGGAGCAAAGGGAACA
ATATCAGCAGAGAGAAGCAACGGCTCAAGAGTCAGCCATGAAGCAAATTCTAAGCAACTA
TTTCAANAAAGGTGATGGTGATGATTCTGGACCGTTTCCCACTTAACTGTAACTGACCAG
TGATATGAGCCATAATTGCCAAAATTTATTGCTGGCTTGCCCTGAAACTGATAGCCGAGT
GANGTCAAACTCTGTGATCCCACCTGGATTTATCAGACTGATGTTCCATTTGATTTGCTT
GTGGATTTTTTACACTTTCAATTTTGTGCTGTATTTATGTATGAACTCTGGTTTCCAGCA
GCGAGCTTGTAGATAGCAAAATTTTCTTGAGCCATTATTACCCATCCCAATTGACTAGCT
GAAATATGCAATTCTCCATCCATGGTAGTGTATGCATTGTGGGGAAAATCTCTCTTCTCG
TAACTTTGTGATCTCTGAGCATTCCTGCAAACTAGCAGTTGTTACTCTTTGTCTGGCTCA
CTTGTCACGGCTGCTCTACTCAATGAGGTGTTCATTCATGGACTTAGCGCAACTCAAGAG
TTAATACTTCATTGACGCCGTAAATACGAGGAATTGGGGCCCATGCAAGCAGTGATGTTA
TGCTAGGTAGAGTCTCAATAACGTAGCTCGTGGCATATCAAGAAATCCTCAATCACTCAA
TGATGGCCCATTCAGCATTAGCCTAGTATAGGCTACTGACCCTTGAACAGTATCTAATAA
CCTTGTGTGCTTTGCATTGCTCTTGTGCTGTAGAATTTTTGGATTTTGGCTGGGAGATTT
CATTTTACACTCTTTTATTTGACATCCTAGCAATGTTCCATATATACATTTTATAAGAAT
CTTTGAAAATGAAGCAATTTGTTCCTGGTTTTGAATTTGATTTAATGCTGTATTGTCAAA
AGCCAAAAGTGTCGTATTTACTAAATGTTTGACATCATATTTGTACAAACCCCTCTATAA
CAGGTGATATGGACATATTTGGAAATTCATATTGCTACGATTTAGTTCCCTACAGCTGCA
CTACAGCTGGTTATAGGTTTCAAAGATATGCTATGGAAATTTTGTATTTACATATATTGA
CTGACATTGTCACACTCATTGACTTTTGACTGACATTAGCTGTGTTTTCCTTGCTGAATT
GCCTTACACATCATCAAATTTAAACGTATTTGATAAATAATTTTCCGAAGCTGTTTATAA
TCTCTGATATTATGAGAAAGATGAAACCATGGTGCTATAATGGATGCATATGCACAGTAC
TGAAATGGTTTTGTAGCATTTACTGTCAATCATACTCCAAAATGCTTTATGTTTTGGATC
TCTTTGTTTCATGCTAGTTGTCATTGTGCTGCTTGAAGTCAAATGAATGATGAATTTTGA
CATTAACTCTTGAGCCCAAAAGATTGAGAAATGTAGCCAACTTCTACTCACAACTTCATG
TGCTATGACTTCTTGACCAATTGATGTCTTTTAGCCAAGAAACCGTTGATCCGGTGCTGA
TGGACATTGTTCTTGGACAGAACATGGAAGGAGGCAAGCAGGTGCCAGCGTAATTTAGGG
GGGGGCGGGTTTCTGACGATAACCTTTTTGAAAGCACTCATTATTAAACCACTCTGGTTT
CTGGTTCGAACAAAGTCCATCCCTTGAAATTACACGCTTGCACCCCTGAATTAAGCCAAA
TCATGCCAGTTGTAGCCACTAATTGCGTTACGATGAGGGTTTTCATGGCGCAGATAACTG
AGAAGAAGGTCACCCAGGCAAAAGGATTATTATTGCATTTATATAATCCACCTGTGAAGC
CAGTGACATCATCAGATCTTTGATTTTACAGGAAGGTCTGTGGTCCGCCTTGCCTCTGTA
GAACCACCACTGTTGCTGGATTAATGCATGTGTAATCCCTGAGTATCATGTACATTCGCA
GATGCAAATCATACTATTCCCAAGCTGCTAGGACTGATGGTTCATGAGATAATTCTAACG
CCTTGGATTGGACTTAACTTTAAAAATGTAATAACGGTTGCGGTTAACTACTGAATTTTG
CTAGTATTTTTTCTGTGGATTGAAGTTTTGCTCCTAACACATCAGACCAAACGCATATAA
GAGACATTGGTTGAAGGTATTCAAATCTACCACACTAAATAAATTTAATGGATGGACATT
GCTTGGTGTGGATCATTTGCAATTTCCATCTTGACAAACACGAAATACTTATCAATCCTC
AGCTGCATGGTTTATTGATGCTTTACCTATAAGATGATGTCACGACACTTTTTTCGAATG
AAACTGCCCAAGTGTCTGAGTTTTCAGCGACAGATCATAANNAGTCGCTATGCTGCTGTA
TTGTGATACGATTTTTCAATTTGTTCCTTTGCTTTTTCAACTTTTGTTATTTTGTAAATA
TCGTGTGCTTGTTTGTGTACTTTATGTATGAGTTGATGTTAATGATTGGTCGGAATCTTT
TTTTGTTGTATATACATTTTTTGCTGTGA
| Gene3D |
p53/RUNT-type_TF_DNA-bd_sf (IPR012346) - T[179-382] 5.3E-65 |
| Pfam |
p53_DNA-bd (IPR011615) - T[180-374] 8.4E-63 - T[394-461] 2.4E-9 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[182-373] 1.49E-57 - T[393-464] 2.07E-10 |
| CDD |
p53_DNA-bd (IPR011615) - T[194-375] 2.57206E-71 |
| PRINTS |
p53_tumour_suppressor (IPR002117) - T[203-229] 3.3E-44 - T[245-266] 3.3E-44 - T[300-321] 3.3E-44 - T[323-345] 3.3E-44 - T[351-373] 3.3E-44 |
| Gene3D |
p53_tetramer_sf (IPR036674) - T[460-507] 3.9E-13 |
| SUPERFAMILY |
p53_tetramer_sf (IPR036674) - T[460-493] 2.62E-7 |
| Pfam |
p53_tetrameristn (IPR010991) - T[461-493] 2.0E-11 |
| PANTHER |
p53_tumour_suppressor (IPR002117) - T[463-511] 2.0E-100 |