- Transcript 'Boleac.CG.SB_v3.S599...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S599.g12121.01.t
Possible name(s)
SDHB
Gene model
Location
S599 [74,378 / 75,981]
Amino acid sequence
Length: 276
>Boleac.CG.SB_v3.S599.g12121.01.p
MASGLMISRTVMRKSIQSLSPLVYNCVRSTATAAQVKSAPRMKKFSVYRWDPENKGKLPV
MQIYEVDLDDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGGNTLACLSKI
DENLKKTTRIYPLPHMYVVKDLVPDMNNFYAQYRSIEPYLKQKDESKKGVENYQSVEDRQ
KLDGLYECILCACCSTSCPSYWWGSDKYLGPAVLMQAYRWIIDSRDDYTKERLQKLNDPF
SVFKCHTIMNCTATCPKGLNPGLAIAEIKKKLSAEA
Nucleotide sequence
Length: 1,173
>Boleac.CG.SB_v3.S599.g12121.01.t
AAGCTTCAATTTTTCGATTGGCGTGAAGACACAAAGTGGAATTTTGGATATTACAATGGC
TTCTGGTTTGATGATTTCTCGTACAGTGATGCGAAAGTCTATCCAGAGTCTTTCCCCGCT
CGTTTATAATTGCGTTAGGTCTACAGCGACAGCCGCACAAGTGAAATCGGCTCCTAGAAT
GAAAAAGTTTTCCGTTTATCGATGGGATCCGGAGAACAAGGGCAAGCTACCGGTGATGCA
AATCTATGAAGTTGATCTAGATGACTGCGGGCCTATGGTGTTGGATGCCTTGATCAAAAT
CAAGAATGAAATCGACCCAACGCTCACTTTTAGGCGATCCTGCAGGGAAGGAATCTGCGG
GTCATGTGCAATGAACATCAACGGTGGAAATACGCTCGCTTGTCTATCGAAAATAGATGA
AAACCTGAAGAAAACGACCAGGATTTATCCGCTGCCTCATATGTATGTAGTCAAGGATTT
AGTTCCGGACATGAATAATTTCTACGCACAATATCGATCCATTGAGCCGTATTTGAAACA
AAAAGATGAAAGCAAAAAGGGGGTAGAAAACTATCAATCAGTTGAAGATCGTCAAAAGCT
GGATGGCTTGTATGAATGCATTCTATGTGCTTGTTGCTCAACCTCTTGTCCAAGCTATTG
GTGGGGATCGGATAAATACCTTGGGCCTGCCGTATTGATGCAAGCATACCGTTGGATCAT
TGATAGCCGNGATGACTACACAAAAGAGCGTTTGCAGAAATTGAATGATCCCTTCTCTGT
ATTCAAATGTCATACTATCATGAACTGCACAGCCACTTGTCCGAAAGGGTTGAATCCTGG
TTTAGCGATTGCTGAGATCAAGAAAAAATTGTCTGCAGAAGCATAGATTTTCTTCCATGA
ATAAATAAGAATTTATTGCTCACTGTTTCATTGAGATTTATTCAGATTTGTCATTGCAAG
ACACTTGTGTTATAGGATACTCTTATTCATGCCTTTTGCAAATGCACATCTCATAATCTC
CTTATACGCTAACCTGCTTGCTGAGTTGCAGCTTGTGGTGTACCTTTTTCATAAATTTTG
TGCACTAGGCACTGGGTAACCATGTATACGCCAATTTCAGTATGACCAACGAGGGTAAAA
ATATGAAGGCCTGACTGTGACTTTGTAGTCGAC
| Gene3D |
Beta-grasp_dom_sf (IPR012675) - T[31-145] 5.2E-49 |
| SUPERFAMILY |
2Fe-2S_ferredoxin-like_sf (IPR036010) - T[41-145] 3.01E-29 |
| ProSiteProfiles |
2Fe-2S_ferredoxin-type (IPR001041) - T[43-136] 9.808 |
| Pfam |
Succ_DH/fum_Rdtase_N (IPR025192) - T[44-150] 1.1E-32 |
| TIGRFAM |
Succ_DH/fum_Rdtase_Fe-S (IPR004489) - T[47-269] 7.5E-85 |
| CDD |
2Fe-2S_ferredoxin-type (IPR001041) - T[64-125] 2.44501E-4 |
| ProSitePatterns |
2Fe2S_fd_BS (IPR006058) - T[96-104] . |
| SUPERFAMILY |
Helical_ferredxn (IPR009051) - T[146-272] 7.67E-36 |
| Gene3D |
Helical_ferredxn (IPR009051) - T[146-276] 1.8E-60 |
| ProSiteProfiles |
4Fe4S_Fe-S-bd (IPR017896) - T[178-208] 7.357 |
| ProSitePatterns |
4Fe4S_Fe_S_CS (IPR017900) - T[188-199] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SDHB_HUMAN | 76.518 % | 414 | 7.74E-148 |
