- Clone 'AHC0AAA242YH19' >
- Transcript 'Boleac.CG.SB_v3.S589...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S589.g11977.01.t
Possible name(s)
FOXA2; FOXB1; FOXB2
Gene model
Location
S589 [49,548 / 51,000]
Amino acid sequence
Length: 483
>Boleac.CG.SB_v3.S589.g11977.01.p
MPRPVRETYGDQKPPYSYIALTAMAINSSPDRMMSLSEIYKYIMDRFPFYRNNTQRWQNS
LRHNLSFNDXFLKIPRRSDRPGKGSLWTLHPTCGTMFDNGSFLXRRKRFKADQEDSNNFK
SPTDSLYPLSHRHHPYQPPRPAIPPQIEQLSSKEGTSSAQHFAQNQLSALMQANWFQATP
YSAMNNQIPNFHDPYAVAAAAYFRRALSEYRAAIATSMLKNGFPSQLPLMAPTPQLPHLN
ALNSLAQMSQFSSIPPVSHTPTESPECLTDGESSNERETPSRTSESGKVSFTIENIMSNS
FSKTYTSSEDSNPFAKPIQREDEAKNQISPREIQNTPSPNNSTVKSEPFDWTNTGQDENE
CSSLLVSKYSSSAPNRKNDALRDLYKFTANACDTLSNNRSMTSLTRKKSRSAENICPRKI
VYSPTRSSEPTLLNNSVAPLADENSSVSXRSSAESVKTAKDERSEKSTHKHPIFEKTSAL
LFT
Nucleotide sequence
Length: 1,452
>Boleac.CG.SB_v3.S589.g11977.01.t
ATGCCTCGTCCAGTGCGGGAAACATATGGCGATCAGAAGCCGCCATACTCTTACATCGCC
TTGACAGCGATGGCGATTAATTCTTCACCAGACAGGATGATGAGTTTGTCTGAGATTTAC
AAATACATAATGGACCGCTTTCCCTTCTATCGAAACAATACTCAACGATGGCAAAACTCA
CTGCGACATAACTTATCTTTTAACGATTGNTTTTTGAAGATCCCACGTCGTTCTGACAGG
CCAGGGAAAGGTAGCTTATGGACTTTACATCCAACTTGCGGCACTATGTTCGATAATGGA
AGTTTTTTGAGNAGACGTAAACGATTTAAAGCCGACCAAGAAGACAGCAATAATTTCAAA
TCACCAACGGACAGTTTGTATCCATTGAGTCATCGACATCACCCATACCAACCACCACGT
CCGGCTATCCCACCGCAAATAGAGCAGTTATCATCTAAGGAAGGTACTTCATCTGCACAG
CATTTCGCACAGAACCAACTTTCCGCATTAATGCAAGCAAATTGGTTTCAAGCAACGCCC
TATTCTGCTATGAACAATCAAATTCCGAATTTTCATGATCCATACGCTGTTGCTGCAGCT
GCGTATTTTCGGAGAGCACTGTCAGAGTATCGTGCAGCGATCGCCACATCAATGCTGAAA
AATGGATTTCCATCTCAACTTCCGTTGATGGCACCGACTCCACAGCTGCCGCATCTCAAT
GCTTTGAATTCGCTGGCACAAATGTCACAATTTTCCTCAATACCACCAGTATCTCACACA
CCTACTGAATCGCCAGAGTGTTTGACAGATGGAGAATCAAGCAATGAAAGGGAAACACCA
TCGCGTACAAGCGAATCAGGAAAAGTTTCCTTTACAATTGAAAACATTATGTCAAATTCA
TTCTCAAAAACGTACACATCATCAGAAGACAGCAACCCGTTTGCAAAACCAATCCAACGT
GAAGACGAGGCGAAAAATCAGATTTCGCCAAGGGAAATACAAAATACACCATCGCCAAAT
AATTCAACCGTCAAATCAGAGCCATTTGACTGGACCAATACTGGGCAAGATGAAAATGAG
TGCAGCTCGCTTCTGGTATCAAAATATTCTTCATCAGCGCCTAACAGAAAAAATGATGCG
CTTCGTGATTTATACAAATTCACAGCGAACGCATGCGATACACTATCCAATAACAGAAGT
ATGACTTCATTGACTCGCAAAAAATCGAGATCTGCCGAAAATATCTGTCCACGCAAAATT
GTTTATTCACCCACGCGTTCAAGCGAACCAACGTTGCTAAACAATAGCGTTGCACCATTA
GCTGATGAAAACTCATCGGTTTCTNGNCGTTCGTCAGCGGAAAGTGTTAAGACTGCGAAA
GATGAAAGATCAGAAAAATCGACTCATAAGCATCCTATTTTTGAAAAGACTTCTGCACTA
CTTTTTACTTAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[11-112] 2.2E-41 |
| SMART |
Fork_head_dom (IPR001766) - T[11-101] 1.4E-55 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[12-107] 1.13E-36 |
| Pfam |
Fork_head_dom (IPR001766) - T[13-97] 4.0E-34 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[13-26] . |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[13-107] 36.768 |
| CDD |
Fork_head_dom (IPR001766) - T[13-90] 5.19421E-46 |
| PRINTS |
Fork_head_dom (IPR001766) - T[13-26] 3.9E-21 - T[34-51] 3.9E-21 - T[57-74] 3.9E-21 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[57-63] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXA2_HUMAN | 62.832 % | 171 | 7.49E-48 |
| FOXB1_HUMAN | 72.8 % | 207 | 4.29E-63 |
| FOXB2_HUMAN | 67.769 % | 193 | 1.96E-56 |
