- Region 'REG00000254' >
- Transcript 'Haaura.CG.MTP2014.S8...' >
- Transcript 'KH2012:KH.C14.261.v1...' >
- Transcript 'Boleac.CG.SB_v3.S582...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S582.g11906.01.t
Possible name(s)
HMCN2; IGSF9; IGSF9B
Gene model
Location
S582 [30,996 / 36,004]
Amino acid sequence
Length: 443
>Boleac.CG.SB_v3.S582.g11906.01.p
PPVFNLTPPLEIVKSEGEVLLLRCLATGRPTPVISWLKDGYPMWDGQIVVTTNLTFSLGL
LRNRFTSFLTTIHAPPVFNLTPPLEIVKSEGEVLLLRCLATGRPTPVISWLKDGYPMWDG
QDGVRTSGGQLAISSLKKSHAGKYTCRAQNVVDLIETTTVVHIQTAPTLVAAPQDTAVRE
GEQVLFSCNAVGYPTDIRYEWFYHGLPIQSVGAMADRYVLENDGTVAFDVHVEDAGVIGC
QATNEIGKSRIANATLTVKFPARVREMPPVMYAGLGLSVNLPCPADAVPPVTTVTWYRDG
EKLSVDKDGRFSFGENGALVINPVTRSDSSRYSCXPYNNLGTQGKSTEFSLVVYKAPEFT
LKPDTEYQAEIGKPLTMACDGTGDPPLLISWIKVDEAGKEADITAEGDRINSNDGNITIR
NVVKSDHGKWQCVLSXLHQGRTV
Nucleotide sequence
Length: 1,329
>Boleac.CG.SB_v3.S582.g11906.01.t
CCACCGGTTTTCAATCTAACCCCGCCGCTTGAAATCGTGAAAAGCGAAGGAGAAGTACTT
CTGTTACGCTGTCTAGCTACTGGTCGCCCAACACCGGTGATAAGCTGGCTGAAAGACGGA
TATCCAATGTGGGATGGACAGATAGTAGTCACCACAAATTTAACATTCAGCCTTGGTTTA
TTGAGAAATAGATTCACAAGCTTTCTGACTACTATCCATGCGCCACCGGTTTTCAATCTA
ACCCCGCCGCTTGAAATCGTGAAAAGCGAAGGAGAAGTACTTCTGTTACGCTGTCTAGCT
ACTGGTCGCCCAACACCGGTGATAAGCTGGCTGAAAGACGGATATCCAATGTGGGATGGA
CAGGACGGTGTAAGAACGAGCGGTGGTCAGTTGGCCATTTCCAGTCTGAAAAAGAGTCAT
GCGGGAAAGTACACCTGTCGCGCCCAAAATGTCGTCGATCTGATTGAAACAACAACCGTC
GTACATATTCAGACTGCACCGACACTCGTTGCTGCTCCGCAGGATACGGCCGTTAGGGAA
GGCGAACAAGTGCTGTTTTCTTGTAATGCTGTGGGATATCCAACCGACATCCGTTATGAG
TGGTTTTATCATGGACTACCTATCCAATCGGTTGGTGCGATGGCTGATCGTTACGTTCTG
GAAAACGACGGAACTGTGGCCTTTGATGTTCATGTTGAAGACGCTGGAGTGATCGGTTGC
CAGGCGACAAACGAGATCGGAAAATCAAGGATTGCGAACGCCACGTTGACTGTCAAGTTT
CCTGCTCGCGTCAGGGAAATGCCACCTGTGATGTACGCAGGTCTTGGACTCTCGGTCAAT
TTGCCATGTCCAGCTGATGCAGTTCCTCCTGTAACTACAGTTACGTGGTATAGAGACGGA
GAAAAGCTGAGCGTCGATAAGGACGGACGGTTTAGTTTTGGAGAAAACGGAGCTTTGGTC
ATAAATCCAGTGACAAGAAGCGACTCAAGTCGGTACAGTTGTGANCCATATAACAATCTC
GGCACGCAAGGCAAAAGCACAGAGTTCTCCTTAGTNGTTTATAAAGCTCCGGAATTCACA
CTGAAACCAGACACGGAATATCAAGCAGAAATTGGGAAACCACTCACGATGGCATGCGAT
GGAACAGGCGATCCTCCTCTCTTGATATCGTGGATAAAGGTCGATGAGGCGGGCAAAGAA
GCAGATATTACTGCTGAAGGTGACAGAATTAATTCCAACGACGGCAACATAACCATACGA
AACGTTGTGAAAAGCGACCACGGAAAGTGGCAATGTGTTCTAAGCNTTCTTCATCAAGGA
CGGACGGTT
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[1-70] 2.56E-9 - T[72-168] 3.23E-20 - T[166-263] 9.79E-15 - T[261-363] 1.24E-18 - T[347-435] 2.16E-11 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[2-40] 8.611 - T[76-162] 13.421 - T[167-257] 12.713 - T[261-350] 12.459 - T[357-443] 11.279 |
| Gene3D |
Ig-like_fold (IPR013783) - T[2-72] 1.8E-8 - T[73-163] 1.6E-17 - T[164-257] 2.9E-15 - T[258-355] 9.1E-17 - T[356-442] 3.0E-12 |
| SMART |
Ig_sub (IPR003599) - T[9-73] 190.0 - T[83-164] 4.7E-10 - T[173-259] 4.6E-4 - T[268-354] 7.4E-10 - T[364-443] 24.0 |
| SMART |
Ig_sub2 (IPR003598) - T[15-66] 3.6 - T[89-153] 2.0E-13 - T[179-247] 0.057 - T[274-341] 6.9E-7 - T[370-439] 0.024 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN2_HUMAN | 28.166 % | 140 | 8.27E-36 |
| TUTLB_HUMAN | 31.624 % | 244 | 2.5E-71 |
| TUTLA_HUMAN | 31.967 % | 200 | 2.91E-56 |