Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  2. Transcript 'KH2012:KH.C11.33.v1....' > 
  3. Transcript 'Boleac.CG.SB_v3.S56....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S56.g11629.01.t

Possible name(s)

CNOT3

Gene model

Boleac.CG.SB_v3.S56.g11629

Location

S56 [310,782 / 313,632]

Sequences

Amino acid sequence

Length: 761

>Boleac.CG.SB_v3.S56.g11629.01.p
MADKRKLQSEIDRCLKKVQEGVETFEDXLVLVQMADKRKLQSEIDRCLKKVQEGVETFED
IWQKLHNAANTNQKDKYESDLKKEIKKLQRLRDQIKTWAASNDVKDKKSLLENRKLIETQ
MERFKVVERETKTKAYSKEGLGLAAKIDPAQKEREETMQWLQQTIDKLRYQTDLFESKIE
SSSTHSRKKKVDGDRQKQNEELKNLVERHNFHINKLETLMRMLDNQTIDPTSIKNLQDDL
EYYTESCEDPDFEENEFIYEDFNFDDKLSPTIMPTPSPIEKQLNNSIANSSGAKGEEEDT
IKPVTELVSSSSPLPTNSHSFXSSHNGKDESSELRSRNKSGTTDDILSPRKGSITYSTAN
SVKSLSRSHSTGTTPSKIVQKTNHGQPYAAAAGGQTHNQPANAYTSIESHSNSVDHQGAV
KNLVKSLQKPQEKLSSWQMQSTVNSSSTTTTSTEVQNTVNSLLSSVTANAPTMNGPTTAV
SESVILNDGGFSSKMVNDLSVQQSKPHTGIPPLISDLQAPSHGEFGNYINPGFSSLKKMA
EDAVANAGLDQSESNXAALVQETGNLSINSNQTKXDQNXSIIQAPPNLIRQVPAGSGETR
MTPLLGVAPLGPMPLSKDNLYHQAMLEASWRHMPHPSDSERLRHYLPRNPCPTPTYYHQT
PLPHHDXIDFYLRLSTETLFFIFYYMEASKAQYLAAKALKKQSWRFHTKYMMWFQRXEEP
KTITDEYEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLP

Nucleotide sequence

Length: 2,286

>Boleac.CG.SB_v3.S56.g11629.01.t
ATGGCGGATAAACGGAAGCTGCAAAGTGAAATTGATAGATGTCTAAAAAAGGTTCAAGAA
GGTGTTGAAACGTTTGAAGACATNCTAGTATTGGTACAAATGGCGGATAAACGGAAGCTG
CAAAGTGAAATTGATAGATGTCTAAAAAAGGTTCAAGAAGGTGTTGAAACGTTTGAAGAC
ATCTGGCAAAAATTACACAATGCAGCTAACACGAATCAAAAGGATAAATATGAAAGTGAT
CTGAAAAAGGAAATTAAAAAGCTACAGAGATTACGCGATCAAATAAAAACGTGGGCTGCA
TCCAATGATGTTAAAGACAAGAAGTCGCTGTTGGAAAACAGGAAATTGATAGAGACACAA
ATGGAAAGGTTCAAAGTTGTGGAACGGGAAACGAAAACCAAAGCATACTCAAAAGAAGGC
TTAGGTCTCGCTGCCAAAATTGATCCTGCCCAAAAGGAAAGAGAAGAAACCATGCAATGG
CTACAACAAACCATCGATAAATTACGGTATCAGACAGATTTATTTGAGAGTAAGATCGAA
AGCAGTAGTACTCACTCACGGAAAAAGAAAGTGGACGGGGACAGACAGAAACAAAATGAG
GAATTGAAAAATTTGGTCGAGAGGCACAATTTTCATATCAACAAACTTGAAACGTTGATG
AGAATGCTTGACAATCAAACGATTGATCCTACCAGTATAAAAAACCTTCAAGACGATTTG
GAGTATTATACAGAGTCGTGTGAAGATCCGGATTTTGAGGAAAATGAATTCATTTATGAA
GACTTCAACTTCGATGACAAGTTATCTCCAACGATAATGCCAACACCATCACCCATTGAA
AAGCAACTGAATAACAGCATAGCAAATAGTTCAGGTGCAAAAGGAGAGGAGGAGGATACC
ATTAAACCCGTTACTGAGCTGGTTTCTTCATCATCACCTTTACCTACTAATAGCCATTCT
TTTANATCAAGTCACAATGGTAAGGATGAATCATCAGAGTTGCGAAGTAGGAACAAGTCG
GGCACTACTGATGATATACTGTCGCCTCGAAAAGGATCTATAACGTATTCTACTGCCAAT
TCCGTTAAATCTCTTTCTAGAAGTCACTCGACTGGCACAACACCAAGTAAAATCGTTCAG
AAAACAAATCATGGACAACCGTATGCTGCTGCGGCTGGCGGACAAACACACAACCAACCA
GCTAACGCCTATACGTCTATTGAGTCACATTCCAATTCTGTGGATCACCAAGGAGCTGTG
AAGAATCTTGTAAAGTCTCTCCAGAAGCCTCAGGAGAAATTGTCATCATGGCAAATGCAG
TCAACGGTGAATTCTTCGTCGACTACAACTACGAGTACAGAGGTACAAAATACGGTAAAT
AGTTTGCTCTCATCGGTTACTGCCAACGCACCCACTATGAACGGCCCAACGACTGCTGTG
TCAGAATCGGTCATATTGAATGATGGTGGTTTTTCAAGTAAGATGGTGAATGATTTATCA
GTGCAACAAAGTAAACCGCATACCGGTATTCCACCATTGATTTCTGACCTGCAAGCTCCT
AGTCATGGAGAATTTGGAAATTATATAAATCCAGGCTTCTCTAGTCTGAAGAAGATGGCA
GAGGATGCTGTTGCAAATGCTGGTTTGGACCAAAGTGAAAGTAATANGGCTGCGCTTGTG
CAAGAAACAGGNAATTTGTCAATCAACTCTAACCAGACAAAANCGGATCAGAATNCAAGT
ATCATTCAAGCACCACCTAACTTGATAAGACAAGTCCCTGCAGGATCAGGGGAAACAAGA
ATGACACCGCTACTGGGTGTTGCACCATTGGGACCGATGCCTCTGTCAAAAGATAATTTG
TACCATCAGGCCATGCTAGAAGCCTCCTGGAGACACATGCCGCATCCTTCAGACTCAGAA
AGATTACGACACTACCTTCCAAGAAATCCCTGCCCGACACCAACCTATTATCACCAAACT
CCTCTGCCACATCACGATNCTATCGACTTTTATCTTCGACTGTCAACGGAGACGTTATTC
TTTATATTCTACTACATGGAAGCCAGCAAAGCGCAGTACTTGGCAGCGAAAGCTTTGAAA
AAACAATCATGGAGGTTCCATACCAAGTATATGATGTGGTTTCAAAGACANGAAGAACCG
AAAACTATTACCGATGAATATGAACAGGGAACGTATATATACTTTGACTATGAAAAATGG
GGACAGCGCAAAAAGGAGGGATTCACATTCGAATACCGATACTTAGAAGATAGAGACCTT
CCCTGA

InterProScan

PIRSF
CCR4-NOT_su3/5 (IPR012270) - T[1-32] 4.8E-11 - T[34-522] 2.7E-130 - T[535-761] 3.7E-79
Pfam
Not_N (IPR007207) - T[3-29] 3.9E-7 - T[36-265] 8.6E-91
Gene3D
CCR4-NOT_su2/3/5_N_sf (IPR038635) - T[611-756] 1.4E-64
Pfam
NOT (IPR007282) - T[630-755] 1.5E-39

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CNOT3_HUMAN 65.234 % 338 5.43E-105