- Transcript 'KH2012:KH.C1.145.v1....' >
- EST 'FK176808.1' >
- Transcript 'KH2012:KH.C7.633.v1....' >
- Transcript 'Harore.CG.MTP2014.S5...' >
- Transcript 'Boleac.CG.SB_v3.S547...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S547.g11458.01.t
Possible name(s)
TBL1X; TBL1XR1; TBL1Y
Gene model
Location
S547 [19,732 / 25,804]
Amino acid sequence
Length: 671
>Boleac.CG.SB_v3.S547.g11458.01.p
MKNMSITSDEVNFLVYRYLEESGFHHSAFVFGLESHISQSNINGALVPSAALISXIQKGL
QYVEAEISINEDGMIFEERFSESLSLVDAVMPDVVLARQQQLREKVAAHKLQQEQEKKSL
QKNAEEASNNVDMMSQEAGDAMTSSTTNAVLVMSQSTTTANNSDHVTNSTAITPATSTMI
KQEPQINGDSGNTNGLGVNEMNSIHNDQMDVDPAMNDVGVPVTKATVLRGHDSEVFICAW
NPTCDLLASGSGDSTARIWNLKEDTILSTGSAIGQQLVLRHCIKEGNQEVPSNKDVTSLD
WNCNGSLLATGSYDGFARIWSTDGHLANLLGQHKGPIFALKWNKEGNYILSAGVDKTTII
WDAQSGESKQQFPFHQAPALDVDWQNNTCFASCSTDMSIHVCRLGCDKPVKTFKGHSNEV
NAIKWDPSGRLLASCSDDMTLKVWSMKQDMFVHDLRAHNKEIYTIKWSPAGAGSPNPNQN
LLLASASFDSTVRLWESERGACLHTLTRHQEPVYSVAFSPDGRLLASGSFDKCVHIWNTQ
TGHLVRSYEGTGGIFEVCWNAAGTKVGASASDGTWKKVIGTSRIPLLTEGGGTVCRLLTG
YATEIPPWVQTLSCDGDELVVNVRENVWESTPRVASDVDEQRCLLTLDFCGTNTGFYASV
LADGHNLLIVS
Nucleotide sequence
Length: 2,236
>Boleac.CG.SB_v3.S547.g11458.01.t
TTGTGTAGCTCTAGAATTTTGGCATAGATATCGTAATTGGTGTCATTCATCCATCCTACT
CTGGATCAGTTACTGTTGCTGTCTCTTTGGATTTACAACGGNGCTTTCGATGGATATGGA
TAAGTGATTCGGATNTAAGACTTTGTGGGAATTTGTCGTGAATTGGATGTATTGATGCTT
TCGAAAGTGTTTGTTCCTGGAAAGTGTGGAATTACCTTCGATGAAAAACATGAGTATAAC
ATCAGATGAAGTGAATTTTCTCGTCTACCGATACCTTGAAGAGTCAGGATTTCATCACAG
TGCGTTTGTTTTCGGATTGGAAAGTCACATCAGTCAGTCGAACATAAATGGAGCCCTTGT
TCCGTCTGCGGCGCTCATTTCTATNATACAAAAAGGCCTACAATACGTCGAGGCGGAGAT
CAGTATTAATGAAGACGGAATGATATTTGAAGAAAGATTCAGCGAAAGTTTGTCTCTTGT
TGATGCGGTGATGCCGGATGTCGTTCTCGCGCGACAGCAACAATTGAGAGAGAAAGTCGC
CGCACACAAACTACAACAAGAGCAAGAAAAGAAATCGCTTCAGAAAAATGCTGAAGAAGC
ATCGAACAATGTCGATATGATGTCACAAGAAGCTGGCGATGCAATGACATCATCAACAAC
GAACGCTGTCCTAGTGATGTCACAGTCTACTACGACGGCGAATAACTCGGACCATGTTAC
AAATTCGACGGCTATTACCCCTGCTACCTCAACCATGATAAAACAGGAACCTCAAATTAA
TGGAGATAGTGGAAATACGAACGGACTAGGAGTCAACGAAATGAATTCCATTCATAATGA
TCAGATGGACGTTGACCCCGCTATGAACGACGTCGGCGTGCCAGTTACAAAAGCTACAGT
TCTACGCGGGCACGACTCGGAAGTTTTTATATGCGCTTGGAATCCAACTTGCGATCTGTT
AGCATCAGGTTCTGGGGATTCTACAGCGCGAATATGGAATTTAAAGGAAGACACAATATT
ATCAACGGGAAGTGCGATAGGCCAGCAACTTGTTTTACGACATTGTATCAAAGAAGGAAA
TCAAGAAGTTCCAAGTAATAAAGATGTGACATCACTTGATTGGAATTGCAACGGATCGTT
ATTAGCGACGGGCTCATATGACGGTTTTGCNAGAATTTGGTCGACAGATGGACATTTAGC
CAATCTACTCGGTCAACACAAAGGGCCTATTTTTGCCTTGAAATGGAACAAAGAAGGCAA
TTACATTTTAAGTGCGGGTGTCGATAAAACCACCATTATTTGGGATGCTCAATCCGGAGA
GTCAAAGCAACAATTTCCATTTCATCAAGCGCCGGCTTTGGACGTCGATTGGCAAAATAA
TACATGCTTCGCGTCTTGTTCTACTGATATGAGTATTCATGTGTGCAGACTGGGATGCGA
TAAACCTGTGAAAACTTTTAAGGGACATTCTAATGAAGTTAATGCAATAAAGTGGGATCC
GTCGGGACGGTTACTTGCGTCATGCTCAGACGATATGACTTTGAAAGTTTGGTCCATGAA
ACAAGATATGTTTGTGCACGACTTGCGAGCGCATAATAAAGAGATTTACACCATAAAATG
GAGTCCAGCCGGTGCAGGTTCTCCGAATCCAAACCAAAATTTATTACTTGCCAGTGCATC
ATTTGATTCAACCGTGCGATTATGGGAGTCGGAACGAGGTGCCTGTCTCCATACTTTAAC
GAGACATCAAGAACCTGTTTATTCGGTCGCTTTTAGTCCAGACGGAAGGTTGCTCGCTAG
CGGATCTTTCGATAAGTGCGTTCACATATGGAATACTCAGACCGGTCATCTGGTTCGGAG
TTATGAAGGAACGGGTGGCATATTTGAAGTATGTTGGAATGCAGCTGGAACAAAAGTTGG
GGCGAGTGCCTCGGATGGAACGTGGAAGAAAGTTATCGGCACTTCTCGAATTCCACTTCT
CACTGAAGGAGGAGGGACTGTGTGTCGTTTGTTGACTGGTTATGCAACAGAAATCCCTCC
ATGGGTGCAGACTTTATCGTGCGATGGAGATGAACTTGTTGTGAATGTTAGAGAAAATGT
TTGGGAAAGTACTCCAAGAGTGGCAAGCGATGTTGATGAACAAAGATGCTTGTTGACTTT
GGACTTTTGTGGGACCAACACGGGATTCTATGCATCTGTGCTTGCTGACGGCCACAATCT
CCTCATCGTATCATAA
| SMART |
LisH (IPR006594) - T[7-39] 9.0E-6 |
| ProSiteProfiles |
LisH (IPR006594) - T[7-39] 10.458 |
| Pfam |
LisH (IPR006594) - T[9-35] 5.9E-8 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[216-578] 7.4E-154 |
| SMART |
WD40_repeat (IPR001680) - T[221-260] 6.1E-8 - T[276-321] 5.8E-5 - T[323-362] 6.3E-6 - T[365-403] 0.02 - T[406-445] 1.1E-11 - T[448-496] 3.8E-7 - T[499-538] 7.1E-13 - T[541-576] 32.0 |
| Pfam |
WD40_repeat (IPR001680) - T[226-260] 3.4E-5 - T[293-321] 9.2E-5 - T[331-362] 0.0017 - T[408-445] 3.6E-10 - T[452-495] 0.0018 - T[500-538] 3.5E-10 |
| SUPERFAMILY |
Quino_amine_DH_bsu (IPR011044) - T[227-324] 8.63E-13 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[228-547] 53.705 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[228-269] 15.22 - T[296-321] 10.107 - T[330-371] 13.817 - T[413-454] 15.889 - T[455-505] 10.876 - T[506-547] 17.025 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[247-261] 2.7E-6 - T[483-497] 2.7E-6 - T[525-539] 2.7E-6 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[247-261] . - T[349-363] . - T[483-497] . - T[525-539] . |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[293-575] 1.56E-72 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBL1R_HUMAN | 77.778 % | 624 | 0 |
| TBL1X_HUMAN | 78.649 % | 625 | 0 |
| TBL1Y_HUMAN | 65.674 % | 744 | 0 |