- Transcript 'Haaura.CG.MTP2014.S8...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- EST 'BW407796' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Boleac.CG.SB_v3.S53....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S53.g11272.01.t
Possible name(s)
AF241726.2; TSPAN6; TSPAN7
Gene model
Location
S53 [349,854 / 357,537]
Amino acid sequence
Length: 297
>Boleac.CG.SB_v3.S53.g11272.01.p
MILFVNAESRLLFGCICYCIRWIQQAQNFVYRYLKKIKMASRSMKTTPAMACLKTLLTIF
SLIFLVIGLAFLVAGILAKVKYTMFDELSTINFSTAPWVMIGVGCFIILVGIMGCLATIK
GNTCLLRTYGLLLGIIFICELAGASVAIIFRGQVDTAFKEGMDSALMNYTTDKEKAQALD
QAQSTLHCCGVDNYTDYWKNEHITKYTVPQSCCAKEGGCEEYLASDDSYVNVTGMPDNEI
ETVIYTTGCHTEMKNAIFNNLAVVIGAMFGVAFFQLLGLILACCLASSINANKYELV
Nucleotide sequence
Length: 2,127
>Boleac.CG.SB_v3.S53.g11272.01.t
CTTATGATATTATTTGTAAATGCAGAGAGTAGGCTACTGTTCGGTTGTATTTGTTACTGT
ATAAGGTGGATACAACAAGCTCAAAATTTTGTGTACCGGTACTTGAAGAAAATCAAGATG
GCTTCCAGAAGTATGAAGACGACACCCGCGATGGCTTGTTTAAAAACACTTTTGACTATT
TTTAGTTTGATATTCCTGGTCATTGGCCTTGCCTTCCTTGTTGCTGGCATTTTAGCCAAA
GTGAAATACACCATGTTTGATGAGTTATCCACCATTAACTTTTCTACTGCACCCTGGGTG
ATGATTGGCGTTGGCTGTTTCATAATTCTAGTCGGAATCATGGGATGCTTGGCCACAATT
AAAGGAAACACATGCCTTTTGAGAACGTATGGTCTGCTGCTTGGAATAATCTTCATATGT
GAATTGGCTGGTGCCAGTGTGGCTATTATTTTCAGAGGACAGGTGGACACTGCATTTAAA
GAAGGTATGGATAGTGCGCTGATGAATTACACAACTGATAAGGAAAAGGCTCAAGCACTT
GATCAAGCCCAGTCAACGTTGCATTGTTGTGGGGTGGATAATTACACTGATTACTGGAAA
AATGAGCATATTACCAAATATACTGTGCCGCAATCGTGCTGTGCCAAGGAGGGTGGCTGC
GAGGAGTACCTGGCATCCGATGATTCTTATGTTAATGTGACTGGAATGCCTGACAATGAA
ATTGAAACAGTCATCTACACAACTGGTTGCCATACTGAAATGAAGAACGCAATTTTCAAC
AACCTAGCTGTTGTCATTGGTGCCATGTTTGGAGTAGCATTCTTCCAGCTTCTTGGACTG
ATCCTGGCTTGTTGTTTGGCTTCAAGCATCAATGCCAACAAGTACGAGTTGGTTTAAGTC
ATGTTGGATTTTATATGGAAGAATAGCACATGGGTACTCTGATTTTGTATAAAATTTAAT
GTCGCATTGGGCTCCTGTCTTGAAAAATGATTTGAACAATAACTTTTATGCCGGTTTCTT
TGCTAAACTGATACATTCTTGGGCACTTGTTGTTTTGTGCTGNACTAAATTCACTAGTCA
TAGATTATTATCTATCTTAAGCTGATTACACCGTGTCAATGTTATTCAAGACGTGCCTAA
CAGTTGTCACTGGAATATGGGCGTCTTGAAACTACAAAGTTTGTTATGTATTGCAGCTTG
AAGTTTCATTGTTATATTTTTAGCATCTAATGAATAGCTAGGTCTTTCGGTGATGTAGTA
GCACAGCATATTTTACCTTGATGTCCGTAAGTCATGTGGCAGTTGTGATTGAAGAGATTT
CTATAGCCAGAACTGTGATTATTTATCGTGTTATCAAACATGGTTGTGAGGAACTCCATA
TGCTTGAAACCTCACCCAGTGTTAACAGTATTCAATCGCGAACTCATGGCTCCCTGATCT
ACCATTAAGCCGAGGTTCCAAATTTGTTGCAATTTTTTTTGATTTTATCAACCCATTGAT
TAAAACCTCTCGAAATTACCATGCACATTTTCCAGCATTTCGAGTTGAATTTGATATCGG
GGTCATCATCAATAATACCTCGAGTTGTAGCAAATTGTTTCAGCAGCCTAGCCTTCTATT
GGTGTAATCATTTACATGCTTTTGTGTTGCTGCTTATTGTCCTGTTTCTTATCATGGTGT
ACCCAAACCCGTAAACTCGTAAATTCAAATGTTGGTATTATATACCGTAATAAGTTTGTA
TCCTGATAACGTGTGATTGAATCATATGAAATATACCTGAAAGAAGGAGTCAGGCATGAA
CCTTCAACAAGGCGTAGGGCCTAACCCCAGTTCACACATTTCAGCCCAAGCAGTCCAAGT
TCAAATCTGACTTGGGGGACTCTTGGGCCAAAAGCCTCAAGAAATACAGAGGTTTGGCCT
GGGCAGTCAGGTATGATATGTAGATTAGTACAATTTTGTCGTAGTACGCCGTACTGGATG
CATCTAGTAGGCTAGGCTATGCGTGCGATTCTGGATGTTGGCTTCTCTGAAGTCTAGTAC
TACAAATTTTTACTGTCTTCTCCAAGAACCCAGTATGCAAAAGAATGCTACAACTGAAAT
ACAAGGGCAGACTGAGCCGATAATGAG
| PIRSF |
Tetraspanin (IPR000301) - T[44-296] 2.6E-54 |
| Pfam |
Tetraspanin/Peripherin (IPR018499) - T[53-287] 2.8E-46 |
| PRINTS |
Tetraspanin (IPR000301) - T[55-78] 6.8E-32 - T[93-119] 6.8E-32 - T[120-148] 6.8E-32 - T[263-289] 6.8E-32 |
| ProSitePatterns |
Tetraspanin_CS (IPR018503) - T[104-126] . |
| SUPERFAMILY |
Tetraspanin_EC2_sf (IPR008952) - T[149-260] 5.75E-15 |
| Gene3D |
Tetraspanin_EC2_sf (IPR008952) - T[150-227] 6.9E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TSN6_HUMAN | 34.749 % | 164 | 2.09E-49 |
| TSN7_HUMAN | 34.363 % | 184 | 2.73E-57 |
| CD63_HUMAN | 31.765 % | 130 | 1.38E-36 |