Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phmamm.CG.MTP2014.S1...'
  2. Transcript 'Boleac.CG.SB_v3.S534...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S534.g11324.01.t

Possible name(s)

RPL23A

Location

S534 [80,703 / 82,101]

Sequences

Amino acid sequence

Length: 145

>Boleac.CG.SB_v3.S534.g11324.01.p
MAPKGAKERALKAKKAVMKGLHSERKKKIRTSVKFHIPKTLRHERKPKYPRKSTQKRDRM
DQFAIVKHPLTTESAMKKIXDNNTLVFIVDLKANKPQIKHAVKKLYDIDVSKVNTLIRPD
GKKKAYVKLAPDYDALDVANKIGII

Nucleotide sequence

Length: 529

>Boleac.CG.SB_v3.S534.g11324.01.t
GTTCATTGTTACATCCACGTTCTTTTTGACTCGGTCTTCATCGAGATGGCACCTAAAGGA
GCGAAAGAACGTGCGTTGAAGGCCAAAAAGGCCGTCATGAAAGGTCTTCATTCGGAGAGG
AAGAAGAAAATCCGTACCTCTGTTAAATTCCACATCCCGAAGACTCTTCGACATGAAAGG
AAACCGAAATATCCACGAAAGAGTACTCAGAAGAGGGACAGGATGGACCAGTTTGCTATT
GTAAAGCACCCGCTCACGACCGAAAGTGCAATGAAGAAGATTGANGATAACAACACCCTC
GTCTTCATTGTGGATTTGAAGGCAAACAAGCCCCAAATCAAGCACGCCGTGAAGAAGCTT
TATGACATCGACGTATCAAAGGTCAATACGTTGATTCGACCCGACGGCAAAAAGAAGGCA
TACGTCAAACTTGCTCCCGATTACGATGCGTTGGATGTTGCCAACAAAATTGGAATCATC
TAAATATTACCAATAAACCGTGCTGCAAGAGTTGCAAAATGTCCTGTAG

InterProScan

Pfam
Ribosomal_L23/L25_N (IPR005633) - T[6-55] 6.1E-22
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[27-145] 1.8E-60
SUPERFAMILY
Ribosomal_L23/L15e_core_dom_sf (IPR012678) - T[63-138] 1.26E-27
Hamap
Ribosomal_L25/23 (IPR013025) - T[65-145] 22.546
Pfam
Ribosomal_L25/23 (IPR013025) - T[65-128] 2.9E-16
TIGRFAM
Ribosomal_L23 (IPR019985) - T[69-145] 2.4E-30
ProSitePatterns
Ribosomal_L23/L25_CS (IPR001014) - T[123-138] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL23A_HUMAN 78.571 % 198 2.46E-66