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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S2...'
  2. Transcript 'Boleac.CG.SB_v3.S532...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S532.g11307.01.t

Possible name(s)

PSMB1; PSMB3

Location

S532 [80,512 / 81,130]

Sequences

Amino acid sequence

Length: 205

>Boleac.CG.SB_v3.S532.g11307.01.p
MSILEYNGGAVIAMKGKDCVAIASDLRFGVQAQTLHMDFEKVFPMGERLFIGLAGLTTDV
QTVSSRLEFRRKLYELRENRLIKPKTFLSMVSNLLYERRFGPYFVEPVIAGLDPNTDAPF
IASLDLIGCPMEPEDFVVSGTCSEQMYGMCEVLWRPEMNPEELFECISQSLLNALDRDAV
SGWGAVVHVIEKDRVTTRKLKGRMD

Nucleotide sequence

Length: 618

>Boleac.CG.SB_v3.S532.g11307.01.t
ATGTCGATTTTGGAGTACAATGGTGGAGCAGTTATTGCTATGAAAGGCAAGGACTGTGTT
GCAATCGCATCNGATCTCCGCTTTGGAGTGCAGGCGCAAACACTTCATATGGACTTTGAA
AAGGTTTTTCCCATGGGTGAACGACTGTTCATTGGATTAGCTGGGTTAACTACTGATGTC
CAAACAGTTTCAAGTCGCTTGGAATTCCGCAGGAAGCTCTATGAGTTGCGTGAAAACCGT
TTGATCAAGCCAAAGACCTTCTTGAGTATGGTATCAAATTTGCTATATGAAAGAAGATTT
GGACCTTACTTTGTGGAACCAGTCATTGCTGGTCTAGACCCGAATACTGATGCCCCATTC
ATTGCNTCTCTTGATTTGATTGGATGCCCAATGGAGCCTGAAGATTTTGTTGTTAGTGGA
ACATGCTCTGAACAAATGTATGGTATGTGCGAAGTTTTATGGAGGCCCGAAATGAATCCT
GAAGAACTTTTTGAATGCATTTCGCAATCTCTGCTAAACGCTCTTGATAGAGATGCCGTG
TCTGGATGGGGAGCAGTTGTTCACGTTATTGAAAAAGACAGAGTCACAACTCGAAAGTTG
AAAGGCAGAATGGACTAG

InterProScan

PANTHER
Proteasome_beta_3 (IPR033811) - T[1-205] 5.4E-108
Gene3D
Ntn_hydrolases_N (IPR029055) - T[1-205] 7.8E-57
SUPERFAMILY
Ntn_hydrolases_N (IPR029055) - T[4-205] 5.7E-55
CDD
Proteasome_beta_3 (IPR033811) - T[6-201] 1.35157E-131
Pfam
Proteasome_sua/b (IPR001353) - T[7-190] 9.5E-42
ProSiteProfiles
Proteasome_suB-type (IPR023333) - T[8-190] 48.886
ProSitePatterns
Proteasome_bsu_CS (IPR016050) - T[12-59] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PSB1_HUMAN 24.88 % 80.9 1.12E-18
PSB3_HUMAN 72.195 % 328 7.37E-116