- Transcript 'Boleac.CG.SB_v3.S532...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S532.g11302.01.t
Possible name(s)
RBM4B; ZC3H7A; ZC3H7B
Gene model
Location
S532 [16,669 / 32,953]
Amino acid sequence
Length: 1,467
>Boleac.CG.SB_v3.S532.g11302.01.p
MVKIFVGRLAESVTRDDLQKLFEKYGEVSDCDILRDYGFVHMADENRAQKAIRELDRMEL
CGSRISVEISTSRSMKSCQLTVGNLPDCTSLADVHKLFKKFGTVTLCRVNGSQASVHMRW
ASMAVQAIRNLNGETYKGNVLSVQFATNSTSKEDWSPTSTTPTQPAAMRPPNSTSQSGQR
FPTSNNVSTTNTQPPNTNFPQAWTNFVNNNSTNHSLTNGNVTNSGFTTHPPSGSNNTNAI
PPLMPPNNDQNHGDNKIPLKNNVIDTSNKQPADSLNHSTLPNSGFEESSKAAEVAKCRME
RRQYIQQGLQFLQSPRPWAGTPEEYTSFLNQIKQMLLQEGKELRKELALGDSVQKLSEAL
NMCKYMESEGIKGHNANIVILLVERSSVLLDMGQVSPAMDDANRALQISNGGSQDAVRCK
VKCLIKIGNLKDAYDLLMQFSRSNSLDQESKDIFNNLVQILGLRTRKPYQPFASFNSMPP
TPGSDPSKGDQQNNFPLKPDVSAPNPINPQIDNFGKSTSNSNLLPFGGSTDSFNPNFTPS
SDNQNKINATAMQNFQNRPPQPPQMMQGFNKTPGTSLHSFPQFERQSSAPPGHNMVNGGM
QPQKSPMPPIGPRPIGSRLMPNPYSNFQQPNDQPSIADSLRKNLEIMTSDTPSQSMFGQN
SGMRMDQSVDLVTGIQKLAVGQQLKENGLPGDLHKTPSDAPSGSMMWDYMSGKSNNNNNV
PGGFSSSSLPPIGYRKPFSGSPMGGDXLLSPPSNSPGALSLLSSSSESHFGIADGFNKMQ
XNPLKGSLLNDIRSPNTNHDQGFAISNPGGIMSPSDQIGVMRLSSDPGVFSHSGPSYSHF
AQNSGHSGLSQLFGPSAIGIGIPPTTQQNKPPQQRPITQQTAASVVLSQKTYSEKSEDSL
DIINPDDDESLDSYLRNPLHNTHEFKLGCSDCVLKTGSSVVDYQYDENLNHMCYKNILLC
RRRDSTDWHKIRPRPQPQSKAQLYDGPYYICKDLLAGTDCTYPVVCTFAYNQEEIDVWTL
ERKQMLNRRWLFDSLDEEYMRELTVVGRVLCKHRGLLEYLCQSCFANKPRIISTFNINTG
MCNNVDADHPDSEDNRQLTHILRDTAVRYTAIRVPAQQPILCRHEVRFQCTREEDCHFAH
SLVERXVWALMIKKGLTPDQIVEQSRDYMKKLNNNINSLDQGISQSSDLGVPMFRWKVKF
ICSLCYKNGQISEATKDRKYCSARAQHSWATNKKTVLVQTIRKDWTQIRDLPYLKNKALP
ARFELCENIRKQKKCPFSNKCNFAHSQEELDIWIYLRDNQLKDLEDLHDSLSRDKXAKAN
SVNKNAAAIIGTSDPNAIRLPTDFLPQSAYHCWLCNKECNGQRQWEQHCLSVKHRLGALS
DADGNWKYRNPGGNYEVCERHLKNACEYDSVAPFENMCRSAHSIEELEEWKQRREYVINR
IKKAQNDQLISAADSMDKLLKESRQHQ
Nucleotide sequence
Length: 5,404
>Boleac.CG.SB_v3.S532.g11302.01.t
TTTCGTTTACCATTCAAGCAACTCACCTTTTACATAGGCTTATTCATGCTGCTTTTTTAC
TGTTTTTTTAATCTGTTTGTGGAAGCGAAGCTACAATACTAACAAAGTCACATCNAACCA
TTGAGGTATGGTGAAAATTTTCGTTGGCCGATTGGCTGAATCGGTCACACGTGATGATTT
ACAAAAACTCTTTGAGAAATACGGCGAAGTATCAGATTGTGATATATTACGAGATTATGG
ATTTGTACATATGGCTGATGAGAATCGAGCACAAAAGGCTATTCGTGAATTAGATCGGAT
GGAGTTATGCGGAAGTCGCATCAGTGTCGAAATTTCTACTTCAAGATCAATGAAATCCTG
TCAACTAACCGTCGGAAATCTTCCTGATTGCACTTCGTTGGCNGATGTACATAAACTGTT
CAAAAAGTTTGGAACGGTCACTTTATGTCGTGTCAATGGTTCACAAGCTTCTGTCCACAT
GAGGTGGGCATCAATGGCAGTTCAAGCGATAAGAAATTTGAATGGAGAAACATACAAAGG
CAATGTTTTATCGGTTCAATTTGCGACTAATTCAACGTCTAAAGAAGATTGGTCTCCGAC
ATCAACCACACCAACTCAACCCGCTGCTATGCGTCCACCCAATTCAACATCTCAATCTGG
TCAGAGATTTCCAACGAGTAATAATGTTTCAACTACGAATACCCAGCCACCAAATACTAA
TTTTCCACAAGCATGGACAAATTTTGTTAATAATAATTCTACAAACCATAGTCTTACAAA
TGGAAACGTGACGAATTCTGGTTTTACTACGCATCCACCATCTGGATCCAACAACACCAA
TGCTATCCCTCCGTTGATGCCTCCGAATAATGATCAGAATCATGGTGATAATAAAATTCC
ATTGAAGAATAATGTGATTGACACATCTAACAAACAACCTGCTGACTCGCTGAACCACTC
CACTTTACCAAACTCGGGTTTTGAAGAATCAAGTAAAGCCGCAGAGGTGGCAAAATGCCG
AATGGAGAGGAGACAGTATATCCAACAAGGCTTGCAGTTCTTGCAGTCTCCTCGTCCATG
GGCTGGTACACCAGAAGAATATACTAGTTTTTTGAATCAAATCAAGCAGATGCTGCTACA
AGAAGGCAAAGAATTGAGAAAGGAGTTGGCTCTAGGTGACTCTGTCCAGAAGCTAAGCGA
AGCCCTCAACATGTGCAAATATATGGAGTCGGAAGGAATAAAAGGACACAATGCAAATAT
TGTAATTTTACTTGTTGAGAGATCGTCAGTGCTGCTAGACATGGGTCAGGTATCACCCGC
TATGGATGATGCCAATCGAGCTCTTCAAATCAGTAATGGTGGAAGCCAAGATGCAGTTCG
TTGTAAAGTGAAATGTTTAATAAAGATTGGAAATTTGAAAGACGCTTACGACCTTCTTAT
GCAGTTTTCACGCAGTAATAGCCTGGATCAAGAATCCAAGGATATTTTCAATAACCTTGT
ACAAATCTTGGGCCTTCGAACCCGGAAACCGTATCAACCTTTTGCAAGTTTCAACTCAAT
GCCGCCAACTCCTGGGAGTGATCCAAGCAAAGGCGATCAGCAAAATAACTTTCCTCTAAA
GCCTGATGTATCTGCACCTAATCCAATCAATCCGCAAATTGACAATTTTGGAAAATCGAC
CAGCAATTCTAACCTTTTACCGTTTGGTGGGTCAACCGATTCTTTTAACCCGAATTTTAC
GCCTTCATCTGATAATCAAAATAAAATAAATGCCACCGCTATGCAAAATTTTCAAAATCG
GCCGCCACAACCACCCCAAATGATGCAGGGGTTCAATAAGACGCCAGGTACATCATTGCA
TAGCTTCCCGCAGTTTGAACGACAGTCATCTGCTCCTCCTGGACATAATATGGTCAATGG
TGGCATGCAGCCACAAAAATCTCCTATGCCACCAATTGGCCCAAGGCCTATTGGATCACG
TTTAATGCCGAATCCGTACAGCAATTTTCAACAGCCTAATGATCAGCCGTCCATCGCCGA
TTCTTTGAGAAAGAATTTGGAAATCATGACAAGTGACACACCGTCGCAATCCATGTTTGG
GCAAAATAGTGGAATGCGAATGGATCAATCAGTCGATCTTGTTACTGGAATACAAAAGCT
TGCTGTAGGTCAACAACTCAAAGAGAATGGCCTACCAGGCGACTTGCATAAAACTCCATC
TGATGCACCATCTGGTTCTATGATGTGGGATTATATGAGTGGAAAAAGTAACAACAATAA
TAATGTACCAGGAGGCTTTTCATCATCATCCTTACCTCCCATTGGATATCGCAAACCGTT
TTCTGGATCTCCAATGGGTGGGGATNCTTTGCTCTCACCTCCTTCAAACAGTCCTGGAGC
ACTGTCGTTGTTGTCAAGCTCCAGTGAATCTCATTTTGGGATAGCTGACGGTTTTAATAA
AATGCAAGANAATCCATTGAAAGGATCGTTACTGAATGATATCAGGTCACCCAATACAAA
TCATGACCAAGGATTTGCGATTTCAAACCCTGGAGGTATTATGAGTCCATCAGACCAGAT
TGGAGTAATGAGGCTGTCTAGTGACCCGGGTGTTTTTTCACACTCCGGCCCCAGCTATTC
TCATTTTGCTCAAAACTCTGGGCATTCTGGTCTGAGTCAGCTTTTTGGACCCAGTGCCAT
CGGAATCGGTATTCCTCCTACTACGCAACAAAACAAGCCACCACAACAAAGACCTATTAC
TCAGCAAACTGCTGCTAGTGTTGTATTGAGTCAAAAGACATACAGTGAAAAATCTGAAGA
CTCTTTGGATATCATTAATCCTGATGATGATGAATCATTGGATAGTTATCTGCGCAATCC
CCTTCATAACACTCATGAATTTAAACTTGGCTGCTCGGATTGTGTCTTGAAAACTGGATC
AAGTGTAGTTGATTATCAGTATGACGAAAACTTGAATCACATGTGCTACAAAAATATATT
ACTGTGTCGAAGACGTGACAGTACAGACTGGCACAAGATTCGCCCGCGACCTCAGCCACA
ATCAAAGGCTCAGTTGTATGATGGGCCATATTATATTTGCAAGGATCTTCTTGCTGGCAC
TGATTGCACATATCCTGTGGTTTGTACCTTTGCGTATAATCAAGAAGAGATTGATGTTTG
GACTTTGGAGAGAAAGCAAATGCTTAATCGTCGGTGGTTGTTTGATTCTCTCGATGAGGA
GTACATGCGTGAATTAACTGTCGTCGGTCGTGTGCTGTGCAAACATAGAGGCCTTCTCGA
ATATTTATGTCAATCTTGTTTTGCGAATAAACCTCGCATTATTAGCACATTCAACATCAA
CACAGGAATGTGCAACAATGTGGACGCCGACCATCCAGATTCTGAAGATAACAGGCAATT
GACTCATATTCTACGCGACACAGCAGTCCGCTATACAGCTATTCGTGTTCCTGCTCAGCA
GCCTATTTTATGCCGACATGAAGTGAGATTTCAATGCACTCGTGAAGAAGATTGCCATTT
CGCGCATAGTCTCGTGGAGAGAGANGTGTGGGCTTTAATGATCAAAAAAGGGTTAACTCC
TGATCAGATTGTTGAACAGTCGAGAGATTACATGAAAAAGTTGAATAATAACATCAACTC
NTTAGATCAAGGCATTTCTCAAAGCTCGGATTTGGGTGTGCCAATGTTCAGGTGGAAAGT
CAAGTTTATCTGCTCTCTTTGTTATAAAAATGGTCAAATTAGTGAGGCTACGAAAGATCG
CAAATACTGCTCGGCCCGTGCACAACACTCGTGGGCAACTAATAAAAAGACGGTTCTCGT
ACAAACAATTCGAAAAGACTGGACTCAAATTCGTGATTTACCTTACTTGAAAAATAAGGC
TTTGCCAGCAAGGTTTGAACTGTGCGAAAATATCAGGAAACAGAAAAAATGCCCATTTTC
GAATAAATGCAACTTTGCGCATTCTCAGGAAGAACTTGACATTTGGATTTATCTACGCGA
TAATCAATTGAAAGATTTGGAAGACCTCCATGACTCGTTGAGTCGCGATAAACANGCAAA
AGCAAACTCGGTTAATAAAAATGCTGCTGCTATAATTGGTACAAGTGATCCAAACGCGAT
ACGTTTGCCTACGGATTTTCTGCCACAAAGTGCCTATCATTGCTGGCTTTGTAATAAGGA
ATGCAACGGTCAGCGACAATGGGAACAACACTGTCTATCTGTGAAGCATCGTCTTGGTGC
ATTGTCTGATGCTGACGGTAATTGGAAATATCGCAACCCGGGAGGAAATTATGAAGTTTG
CGAAAGGCATTTGAAGAATGCTTGTGAGTACGATTCTGTGGCGCCATTTGAAAATATGTG
CAGATCTGCTCACAGTATTGAGGAATTGGAGGAATGGAAGCAACGGCGAGAATACGTTAT
TAACAGGATTAAGAAGGCACAGAATGATCAGTTGATCAGCGCAGCNGATAGTATGGACAA
ATTGCTTAAAGAATCGCGACAGCATCAATAATGTGAACGTTACATGTTTTCACNATGTTG
TGTTCGCGTGAATATCAATGCCTTTTTATCGTTTTCATGGTGCTACCGAAAGAACNTTTT
GTGGAGGATTTGATGAATCGCCCACGATGTGACGTCACGACATTTTGTCGTCAACTTGCT
CGTCGCGAATTCTTGCTGTCGTTTTAATTTTTTGGATTTCTTTATGAAGGACTTTTGCCT
TACTGTCCACGTCATTTTATCCCATGATTATGTGATGATTTTGTTGATCTTGTTATCTTC
GCATGAGAAAACTATGTTGCGACTCAATGACTTTTGCGGAGATGGTACAGCCATGATCAA
ACGAGTTTCATTGTGCTGTACGTTTCTTGTGTGTCATTTTTATGTTTTGATAAACTTGAT
CGCAATCAGGTTGAATAGCACTATTTTGATATGTTTGTTGAAATCGTGCACTCTGTCGAG
TCCCCGCCAATATTTTTGTTGGACATTTTTAGTACTTTCAATGTATCAACCTTTCTACGG
CAACTTTTGCTTGAGACGGCCGTGATTGCGCCATACAATGCGTCGGATTGCATTTTTAAT
ATGGTTGAAGCCTTGTAATCATACAATTGATATTCGTGGTTGGTACTTGATGTTTTCTCG
TTTCTTGATGCGGTGACATCAAAATGATGATTGTGACATCACTACCTTAATATAAGAGCT
CTGTGCTTTGAAAGAGATCCAAGCATGCTTTTTCATTCCAGTCTTTTTGCGATAAGAAAG
TTTCACTTTCTGCTACCGGTGATCATTAGGATCCTTGTAATCTTTAATAATAAATACACA
GTGTAAAAACGAACCTTTATCTTCTGAAATCCGCCGAACCAAACGCATTCATTAGTCGTT
ACCC
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[2-72] 1.2E-20 - T[73-157] 7.6E-13 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[2-72] 16.551 - T[78-148] 10.428 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[3-150] 5.2E-32 |
| SMART |
RRM_dom (IPR000504) - T[3-68] 1.5E-19 - T[79-144] 7.2E-4 |
| Pfam |
RRM_dom (IPR000504) - T[4-65] 1.1E-14 - T[80-141] 3.1E-5 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[329-467] 2.7E-6 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[334-461] 4.55E-5 |
| SMART |
Znf_CCCH (IPR000571) - T[1116-1142] 4.2 - T[1262-1287] 1.0 |
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[1116-1143] 10.239 - T[1260-1288] 11.582 |
| SUPERFAMILY |
Znf_CCCH_sf (IPR036855) - T[1261-1292] 4.12E-6 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[1346-1375] 1.19E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RBM4B_HUMAN | 40.94 % | 117 | 6.6E-28 |
| Z3H7B_HUMAN | 39.312 % | 409 | 3.52E-123 |
| Z3H7A_HUMAN | 39.162 % | 409 | 3.73E-123 |
