- Transcript 'Boleac.CG.SB_v3.S526...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S526.g11183.01.t
Possible name(s)
HMCN1; HMCN2; PXDN
Gene model
Location
S526 [3,012 / 10,744]
Amino acid sequence
Length: 478
>Boleac.CG.SB_v3.S526.g11183.01.p
CQADLTVTVNDVAVLVGEDAVIPCTYESAXENIPKITWSLKRNDGSTQRLYVYDEGDSSQ
TYADAGAPSRTPALAVNEEGSLVMAQTTINDNTDYATLTCEVSLGSDGVQSADAMFVAAL
LPEEAATTSISEYDAGKTGFDVTDTSTNLGFCRSSKSYPAAKITFYKNGKPLPVTGDLAD
LAGIGFTDDVLTTTSEDGISMITNKDLMKIVEITDHQADFTCNIWRASHIWSKGRGFAVG
SPNPLYSMIKVANTEVDLDWDVAYIKRVCGQNMLVAQIEEGRVKTIYGDRVFERNYTMPK
FNVNYQTTMASFDSPPPDAYLGETITLRCTADGFPAPTISIDDQPGAELMVNVTKKVDGK
DYICKAYNNEMQKDTPVTSDPYTMDVLSLSQPVLAGIDGSSVDYGLGDAISIQCSSEGNP
APSIAWYKGNDMISESGTLSFSSASLDNSGGYTCRGTSDYAKLDKSTPLRIEVKGKKA
Nucleotide sequence
Length: 1,434
>Boleac.CG.SB_v3.S526.g11183.01.t
TGTCAAGCTGATTTGACAGTTACCGTCAACGATGTTGCCGTGTTAGTCGGAGAAGACGCG
GTGATTCCGTGCACGTACGAATCAGCAANTGAAAACATTCCAAAAATCACGTGGTCACTG
AAAAGGAATGACGGTTCAACACAGCGGTTGTATGTCTACGACGAAGGGGATTCGTCACAA
ACATACGCCGACGCTGGTGCTCCTTCACGAACACCGGCTCTCGCCGTCAATGAAGAAGGC
AGCCTTGTGATGGCGCAAACTACCATCAATGACAACACGGATTACGCGACGCTCACCTGT
GAAGTATCATTGGGAAGTGACGGAGTCCAGTCAGCAGATGCAATGTTCGTTGCTGCATTA
CTTCCAGAAGAAGCGGCAACAACCAGCATTAGCGAGTACGATGCAGGTAAAACCGGCTTT
GACGTCACCGACACATCGACGAATCTTGGATTTTGTCGGAGCTCGAAATCTTATCCAGCC
GCTAAGATCACATTTTACAAAAACGGAAAGCCTCTTCCTGTAACCGGGGATCTTGCAGAC
CTTGCAGGTATTGGCTTCACGGACGACGTACTGACAACTACATCCGAGGATGGTATTTCT
ATGATAACAAACAAGGACCTCATGAAAATTGTGGAGATTACTGACCATCAGGCAGACTTC
ACTTGTAACATATGGAGGGCGTCGCATATTTGGTCAAAAGGCCGTGGATTTGCTGTAGGG
TCACCCAACCCATTGTACTCAATGATCAAAGTCGCAAATACAGAGGTTGACCTGGACTGG
GATGTCGCATACATAAAGAGAGTCTGTGGTCAAAACATGTTGGTGGCTCAAATTGAAGAA
GGAAGGGTAAAAACCATCTATGGAGACCGGGTATTCGAACGAAACTACACTATGCCAAAG
TTCAACGTTAACTACCAAACCACGATGGCCTCTTTTGATTCACCACCCCCTGATGCGTAT
CTCGGCGAAACGATCACTTTGAGATGCACGGCTGATGGTTTTCCTGCACCAACGATAAGC
ATTGATGACCAACCAGGAGCAGAACTCATGGTCAACGTAACGAAAAAAGTCGATGGAAAA
GACTACATTTGCAAAGCTTATAATAACGAAATGCAAAAAGACACCCCGGTAACGTCAGAT
CCATACACCATGGACGTGCTAAGTCTTTCTCAACCAGTTCTTGCTGGTATCGATGGTAGT
TCGGTGGATTATGGCCTTGGAGATGCCATCTCAATCCAATGCAGCTCAGAAGGAAATCCA
GCTCCATCTATTGCGTGGTATAAAGGAAATGACATGATCTCTGAATCTGGAACGCTCTCG
TTCAGCTCTGCTTCACTCGACAACTCCGGCGGCTACACCTGCCGTGGCACCAGCGACTAC
GCAAAACTCGATAAATCAACACCTCTTCGTATTGAAGTAAAAGGTAAGAAGGCT
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[3-116] 6.905 - T[392-470] 11.206 |
| Gene3D |
Ig-like_fold (IPR013783) - T[5-117] 4.8E-12 - T[137-232] 1.9E-7 - T[387-478] 7.2E-12 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[6-48] 1.38E-6 - T[93-100] 1.38E-6 - T[152-176] 1.38E-6 - T[314-378] 1.44E-6 - T[401-475] 3.38E-11 |
| SMART |
Ig_sub (IPR003599) - T[9-120] 2.2 - T[314-387] 5.3 - T[399-474] 1.1E-4 |
| Pfam |
CD80_C2-set (IPR013162) - T[149-224] 5.5E-5 |
| SMART |
Ig_sub2 (IPR003598) - T[405-461] 2.7E-10 |
| Pfam |
Ig-like_dom (IPR007110) - T[407-471] 5.4E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|