- Transcript 'Boleac.CG.SB_v3.S51....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S51.g10961.01.t
Possible name(s)
NVL; SPATA5; VCP
Gene model
Location
S51 [182,996 / 185,399]
Amino acid sequence
Length: 800
>Boleac.CG.SB_v3.S51.g10961.01.p
MAQGQEDLSTAILKDKVKPNRLIVEETSNDDNSVVVLSQEKMDELQLFRGDTVLLKGKKR
KETVCIALADENVPNEKLCINRCVRNNLRVRLGDVVSIQACPDVKYGKRIHVLPIDDTIE
GISGNLFDVYLKPYFLEAYRPIKAGDIFLVRGGMRAVEFKVVETDPPEFCIVSPDTVIYN
EGEPIKRADEEEALNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGIKPPRGILLY
GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID
ELDAIAPKRDKTHGEVERRIVSQLLTLMDGLKHRAHVVIIGATNRPNSIDAALRRFGRFD
REVDIGIPDATGRLEILRIHTKNMKLADDVDLEQVANESHGHVGADLAALCSEAALQQIR
GKMDLIDLEEETIDAEVMDNLAVTMDDFRWAMAQSNPSALRETVVEVPNITWGDIGGLEN
VKTELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKG
PEMLTMWFGESEANVREVFDKARQAAPCVLFFDELDSIAKSRGGSVGDAGGAADRVINQI
LTEMDGMSNKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDDKSRIQILKANLRKS
PVAKDVDLTYIARVTKGFSGADLTEICQRACKLAIRESIEAEIRAERERRDNADVAMDDD
XDPVPEICRKHFEEAMKFARRSVSDKDIRKYEMFAQTLQQSRGFGGFKFPGSQQSXGGSS
GGQAGSGDLYQENEEDDLYD
Nucleotide sequence
Length: 2,403
>Boleac.CG.SB_v3.S51.g10961.01.t
ATGGCTCAAGGACAAGAAGACTTATCGACAGCCATCTTGAAGGACAAGGTGAAGCCGAAT
CGACTTATTGTTGAAGAAACATCCAATGATGACAACAGCGTCGTTGTGCTTTCTCAAGAA
AAAATGGATGAATTGCAGTTGTTTCGTGGAGATACTGTCCTTTTGAAGGGTAAGAAGAGG
AAAGAAACGGTGTGCATTGCGCTTGCCGATGAAAATGTTCCCAATGAAAAGCTTTGTATC
AATCGTTGCGTCCGAAATAATCTCAGAGTTCGTCTTGGTGATGTGGTAAGCATACAAGCT
TGTCCTGATGTGAAGTATGGCAAGCGTATTCATGTCCTGCCTATTGATGATACCATTGAA
GGAATATCTGGAAATCTCTTTGATGTGTATTTGAAACCATATTTCCTAGAGGCATATCGA
CCAATCAAGGCTGGTGATATCTTTCTGGTACGTGGAGGCATGAGAGCTGTGGAATTTAAA
GTTGTGGAAACTGATCCACCCGAATTTTGTATTGTATCACCAGATACAGTCATTTACAAT
GAGGGTGAACCAATCAAACGTGCGGATGAGGAAGAAGCGCTGAATGAGGTCGGCTACGAT
GATGTCGGTGGATGTAGAAAACAGTTGGCTCAGATCAAGGAAATGGTCGAACTTCCTTTA
CGGCATCCGGCTCTTTTCAAGGCAATTGGAATTAAACCGCCAAGAGGAATTCTTTTGTAT
GGACCTCCAGGAACAGGAAAGACGTTAATCGCAAGAGCAGTTGCAAATGAAACTGGAGCT
TTCTTTTTCTTGATCAATGGTCCTGAGATCATGAGTAAGCTAGCAGGAGAGAGCGAGTCT
AATCTTAGAAAGGCATTTGAAGAAGCAGAGAAAAATGCTCCTGCCATTATATTCATTGAT
GAATTGGATGCTATAGCACCAAAGAGAGATAAAACTCATGGAGAGGTCGAGAGGAGAATC
GTTTCACAGCTGTTGACCTTGATGGATGGGCTAAAGCACAGAGCTCATGTTGTTATTATT
GGTGCCACTAATAGACCAAATTCAATTGATGCTGCTCTCAGGCGTTTCGGCCGTTTTGAC
AGAGAAGTTGATATCGGTATCCCTGATGCTACTGGGAGATTGGAGATCCTACGCATCCAT
ACCAAAAACATGAAGCTGGCAGATGATGTTGATTTGGAACAGGTAGCCAATGAATCGCAT
GGGCACGTCGGTGCTGATCTTGCTGCCTTATGCTCAGAGGCTGCACTGCAACAAATAAGA
GGCAAAATGGATCTTATCGACTTGGAAGAGGAAACCATCGATGCTGAAGTGATGGACAAC
CTTGCTGTCACTATGGATGATTTCAGATGGGCCATGGCTCAAAGCAATCCTTCGGCTCTT
CGTGAAACTGTCGTAGAAGTGCCNAATATAACCTGGGGTGATATTGGAGGTTTGGAAAAT
GTGAAAACAGAATTACAAGAGTTGGTTCAATACCCCGTGGAGCATCCTGATAAATTTTTG
AAATTTGGAATGACCCCATCAAAAGGAGTCCTGTTTTATGGTCCTCCTGGTTGTGGTAAA
ACCTTGTTGGCTAAAGCCATTGCAAACGAATGTCAAGCCAATTTCATTTCNATAAAAGGA
CCAGAGATGTTGACCATGTGGTTTGGAGAATCTGAAGCAAATGTAAGGGAAGTGTTTGAC
AAAGCTAGGCAAGCTGCTCCTTGTGTATTATTTTTTGATGAACTGGATTCTATTGCTAAA
TCTCGGGGTGGAAGTGTCGGAGATGCTGGAGGTGCTGCTGACCGAGTTATCAATCAAATT
TTGACTGAAATGGATGGAATGAGCAACAAGAAAAATGTCTTTATTATTGGAGCTACAAAC
AGACCTGATATTATCGATTCAGCAATTCTTCGTCCTGGACGTCTTGATCAGCTCATATAC
ATTCCTCTNCCTGATGATAAATCTCGTATCCAAATTTTGAAAGCAAACCTTCGCAAGTCT
CCAGTCGCNAAGGATGTTGATCTTACATACATTGCACGAGTAACNAAAGGATTCAGTGGT
GCTGATCTTACAGAAATATGCCAACGAGCATGTAAACTTGCTATTCGNGAAAGTATTGAA
GCAGAGATCAGAGCCGAAAGAGAGAGGCGTGACAATGCCGATGTAGCAATGGATGACGAT
GANGATCCTGTGCCGGAGATTTGCAGGAAACATTTTGAGGAAGCTATGAAATTCGCTCGT
AGATCAGTTTCTGACAAAGACATCAGGAAATATGAGATGTTCGCTCAAACACTTCAACAG
AGTCGTGGCTTTGGAGGATTCAAGTTCCCAGGCAGCCAACAATCTNGTGGAGGTTCCAGT
GGTGGACAAGCTGGAAGTGGAGACCTGTACCAAGAGAATGAGGAAGATGACTTGTATGAT
TGA
| SUPERFAMILY |
Asp_de-COase-like_dom_sf (IPR009010) - T[18-101] 4.22E-26 |
| SMART |
CDC4_N-term_subdom (IPR003338) - T[21-104] 3.2E-24 |
| Pfam |
CDC4_N-term_subdom (IPR003338) - T[21-102] 4.4E-18 |
| TIGRFAM |
AAA_ATPase_CDC48 (IPR005938) - T[32-759] 1.5E-253 |
| SUPERFAMILY |
CDC48_domain_2-like_sf (IPR029067) - T[103-193] 9.81E-32 |
| SMART |
Cdc48_dom2 (IPR004201) - T[121-187] 2.0E-11 |
| Pfam |
Cdc48_dom2 (IPR004201) - T[122-182] 3.4E-10 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[196-458] 3.1E-65 - T[468-757] 9.85E-76 |
| SMART |
AAA+_ATPase (IPR003593) - T[233-369] 9.2E-24 - T[506-645] 1.8E-24 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[237-366] 7.8E-47 - T[510-643] 1.6E-46 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[337-355] . - T[613-631] . |
| Pfam |
Vps4_C (IPR015415) - T[724-756] 1.4E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPAT5_HUMAN | 48.421 % | 558 | 0 |
| TERA_HUMAN | 85.05 % | 1345 | 0 |
| NVL_HUMAN | 42.857 % | 481 | 4.21E-158 |