Aniseed - Transcript Card

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S503.g10875.01.t

Possible name(s)

DPCD

Gene model

Boleac.CG.SB_v3.S503.g10875

Location

S503 [57,844 / 58,444]

Sequences

Amino acid sequence

Length: 199

>Boleac.CG.SB_v3.S503.g10875.01.p
MASHWVETLRSARKTALLQDGRRKVHYTFSDGKELVEEYDAKTDDLVVRKWRRKTQLGGQ
TAWEIEIGTEHSPPSNMTAMDFSESLSNPAVCRKDTSRAFQWRIRNLSYPLETYXLKVEG
DHIVVRTTNKKYFKRIEIPDMKREGLKLAQADLTYAHANNTLIIQYKKPTKILNIHETIV
HELKQLKISKDGDADCRPS

Nucleotide sequence

Length: 600

>Boleac.CG.SB_v3.S503.g10875.01.t
ATGGCATCACACTGGGTAGAGACTTTACGTTCTGCACGCAAAACCGCATTGTTGCAAGAT
GGTAGAAGAAAAGTTCATTACACATTTTCAGATGGAAAGGAGTTGGTAGAAGAGTATGAT
GCAAAAACTGACGATCTCGTGGTGCGGAAGTGGCGGCGCAAGACACAGCTCGGAGGCCAA
ACTGCTTGGGAAATTGAAATTGGGACAGAACACTCCCCACCAAGCAACATGACGGCTATG
GATTTTTCTGAATCACTATCAAATCCAGCAGTCTGTCGTAAAGACACNAGCAGAGCGTTT
CAATGGAGAATACGGAATTTATCGTATCCGCTAGAAACATACNATCTAAAGGTGGAAGGT
GATCATATAGTAGTAAGAACCACCAACAAAAAGTACTTCAAACGAATCGAAATTCCAGAT
ATGAAAAGAGAAGGTTTGAAATTAGCTCAGGCTGATTTGACATATGCACATGCAAATAAC
ACTCTAATAATCCAGTACAAAAAACCTACCAAAATTTTGAACATTCATGAAACAATTGTT
CATGAACTAAAACAATTGAAGATTTCAAAAGATGGTGATGCAGACTGTAGGCCTTCATAA

InterProScan

PANTHER	DPCD (IPR026224) - T[3-198] 2.8E-83
Pfam	DPCD (IPR026224) - T[5-190] 2.0E-77
PRINTS	DPCD (IPR026224) - T[35-52] 1.5E-27 - T[89-104] 1.5E-27 - T[104-119] 1.5E-27 - T[123-141] 1.5E-27

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
DPCD_HUMAN	50.761 %	203	8.47E-67