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  1. Transcript 'Boleac.CG.SB_v3.S49....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S49.g10585.01.t

Possible name(s)

FCN2; TNC; TNXB

Location

S49 [173,588 / 175,387]

Sequences

Amino acid sequence

Length: 327

>Boleac.CG.SB_v3.S49.g10585.01.p
MLLPLIVVFLAPPACLAGEDAIPATLDDFLRQYCRNNPTDEYRXITSSIFINGQFGDIGS
RGETGEPGFPGPTGPVGLQNDTLIREKFLENLKTVFRHMNWSAFLGVKLQSCQDVIDKLS
FLPYVKSGVFSLYRPNQGWTDVYCDLTGEQEGWTVFQRRMDGSVEFYRGWDDYVNGFGDE
HGEFWLGLEEMHRLTRSGQHELRIDMISDNGTYVRANYRHFKIGPASDKYRLYVGGYSGN
ATDALANPPNVQAIHNGRQFSTYDNDGGNCAQSWKGAWWYKFCYYSNLNGLYHDKNYQGV
VWRTTDDQRMNMRFTEMRLRRVPADQH

Nucleotide sequence

Length: 984

>Boleac.CG.SB_v3.S49.g10585.01.t
ATGTTACTTCCATTAATCGTAGTATTTCTAGCCCCACCAGCCTGCCTAGCTGGTGAGGAT
GCTATCCCAGCGACACTGGATGACTTTCTACGTCAATATTGTCGTAACAATCCTACTGAT
GAATATAGGCNTATTACCAGTTCGATTTTCATAAACGGTCAGTTTGGCGATATAGGATCT
CGTGGAGAAACTGGCGAGCCGGGTTTCCCGGGTCCAACCGGACCTGTTGGCTTACAGAAT
GACACTTTGATAAGGGAAAAGTTTCTGGAAAATTTGAAAACAGTGTTTCGTCACATGAAT
TGGTCTGCCTTTCTCGGAGTGAAACTTCAAAGTTGCCAAGACGTGATCGACAAGCTTTCG
TTTCTGCCGTACGTGAAGAGTGGAGTTTTCAGTCTTTACCGACCGAACCAAGGATGGACG
GATGTCTACTGTGATTTGACCGGGGAACAGGAAGGCTGGACGGTGTTTCAACGTCGCATG
GACGGCAGTGTTGAATTCTACAGAGGCTGGGATGACTACGTGAACGGATTCGGAGACGAA
CACGGAGAGTTCTGGCTCGGTCTGGAAGAAATGCACCGACTCACTCGATCAGGACAACAT
GAACTGAGGATTGACATGATATCGGACAACGGGACTTATGTGAGAGCAAATTACAGACAC
TTCAAAATTGGACCAGCATCCGACAAGTACCGTCTATACGTTGGTGGCTACTCTGGCAAT
GCAACAGACGCTTTAGCCAACCCTCCGAACGTACAGGCAATCCACAACGGTCGGCAATTC
AGCACATACGACAACGACGGTGGTAATTGTGCGCAGTCATGGAAAGGAGCGTGGTGGTAT
AAGTTCTGTTATTACAGCAATCTGAATGGGTTGTACCATGACAAAAACTATCAAGGAGTC
GTCTGGAGAACGACCGATGACCAACGAATGAACATGCGCTTTACCGAGATGAGGCTACGT
CGAGTACCAGCAGATCAACACTGA

InterProScan

ProSiteProfiles
Fibrinogen_a/b/g_C_dom (IPR002181) - T[103-323] 47.204
SUPERFAMILY
Fibrinogen-like_C (IPR036056) - T[103-322] 1.83E-70
SMART
Fibrinogen_a/b/g_C_dom (IPR002181) - T[107-322] 4.2E-72
CDD
Fibrinogen_a/b/g_C_dom (IPR002181) - T[110-322] 7.80534E-84
Pfam
Fibrinogen_a/b/g_C_dom (IPR002181) - T[138-320] 4.0E-59
ProSitePatterns
Fibrinogen_CS (IPR020837) - T[278-290] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FCN1_HUMAN 38.989 % 187 2.96E-57
TENA_HUMAN 42.786 % 159 3.4E-43
FCN2_HUMAN 38.267 % 150 7.15E-43