Aniseed - Transcript Card

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S492.g10633.01.t

Possible name(s)

ARMC6

Gene model

Boleac.CG.SB_v3.S492.g10633

Location

S492 [36,325 / 54,961]

Sequences

Amino acid sequence

Length: 470

>Boleac.CG.SB_v3.S492.g10633.01.p
MTGTKPLRTISQETFDNVVQENINDFEMDHQQALEDAIEQFKSQGVNISNIIKEVPTNGK
HKVALLANSLSDMLIQEECWDKESAADTVRSLKVELCSDLSKRYFASKTTDISENLFRLC
VKATQNTRFETDSFKAYCALVNGQPDEATWQHMEFFICRLKDTDDAEQAEVLCKXLKHLC
TMQENNRQTLVKMGIISTLMEAMEKYIRHVGVIRECCGTFRALTLDDDVRVEFGQSHEHA
KMIVTERSGLQRFVNVLKEYYSDPMLAKEIAATLSKVMVRNEFCQDFVDMGGFSALREAV
STHMAIVGVVKQCVDLLRAISRNDDVKIYVMKDGVVGMLMEVLEKYIANPSICESCFAAL
TTLTLRNPAHCKVVASAAVAPVVVQAMKVHKDHAGVQKATCMLIRNLVARTREYSSTFLE
LGAEELIRSARRKHSSVPDVDDLAKAALRDLDLDVDLQQLWXGTNRQVTN

Nucleotide sequence

Length: 1,794

>Boleac.CG.SB_v3.S492.g10633.01.t
AGGATTTTGAAATAGATTACTCCTAATTTGGCTAGATTGGTATAATGACTGGAACAAAAC
CACTTAGAACAATCTCTCAAGAAACATTCGATAATGTTGTACAAGAGAATATTAATGATT
TTGAAATGGATCATCAACAGGCACTGGAGGATGCTATTGAACAGTTCAAATCTCAGGGTG
TGAATATTAGCAACATCATTAAAGAAGTTCCCACAAATGGAAAACATAAAGTAGCATTGC
TTGCCAACTCTTTATCCGATATGTTAATACAGGAAGAATGTTGGGATAAAGAATCTGCCG
CGGATACGGTACGTTCTTTAAAGGTTGAGTTGTGTAGTGACTTATCGAAAAGATACTTTG
CTTCTAAAACAACTGATATCAGTGAGAATCTTTTCCGGTTGTGTGTGAAGGCAACACAAA
ATACCCGTTTTGAGACAGATTCGTTCAAAGCCTACTGTGCCCTAGTGAATGGGCAACCAG
ATGAAGCTACTTGGCAACATATGGAGTTCTTTATCTGTCGTCTCAAAGATACCGATGATG
CTGAACAAGCAGAAGTATTATGCAAGNTTTTGAAACATTTATGCACTATGCAAGAAAATA
ATAGACAAACTCTTGTGAAAATGGGAATTATTTCAACGCTCATGGAGGCCATGGAAAAAT
ATATCAGACATGTTGGTGTGATTCGAGAATGCTGTGGGACATTTCGTGCATTAACATTGG
ATGATGATGTTCGAGTTGAATTTGGTCAGTCTCATGAGCACGCTAAAATGATTGTGACGG
AGCGGAGTGGCCTACAGAGATTTGTTAATGTATTGAAAGAATATTATTCTGACCCGATGC
TAGCAAAAGAAATAGCGGCGACTTTGTCAAAAGTCATGGTACGGAATGAGTTTTGTCAAG
ATTTTGTCGATATGGGAGGATTTTCTGCATTGAGAGAGGCAGTTTCAACGCACATGGCTA
TTGTCGGCGTGGTTAAGCAATGCGTGGATCTTTTACGAGCAATCAGCCGGAACGATGACG
TTAAAATTTACGTAATGAAAGATGGAGTCGTTGGAATGTTGATGGAAGTGTTGGAGAAAT
ACATCGCCAACCCCTCGATTTGCGAATCATGCTTTGCTGCACTTACAACTTTGACTCTGC
GAAATCCTGCTCATTGCAAAGTTGTTGCCAGTGCCGCTGTGGCGCCGGTCGTTGTTCAAG
CGATGAAAGTACACAAAGATCATGCCGGAGTTCAGAAAGCGACGTGTATGTTGATTCGTA
ATCTTGTCGCAAGAACGAGAGAGTATTCTTCCACGTTTCTTGAGTTAGGAGCTGAAGAAT
TGATCCGCTCCGCAAGAAGGAAGCATTCTTCAGTACCTGATGTTGATGATCTGGCGAAAG
CTGCTCTCCGCGATCTCGATCTGGATGTCGATCTTCAACAACTNTGGANGGGTACCAACC
GGCAAGTCACAAATTGAACTCAATGTAACTCTGTACCGACATCTAGCGGTCGATTTTTCG
CTTTAAATTAACTTCACGTCTTTCCGAGTTCGTCTTTAGGTTNTCGAAAGGCAAAGCTAA
CAGTGATGCATCACATGGATTGAATGCTGTTCCGTCATCAGCCCCATGACACTGGTTGTT
ATTTGCTCACTGTATCAGCACAACCTTTTCTACATTTAAACCTAGGTTTAGCCGTTATAG
TTTTGTCTANGAACCTACAACTGTGTTTGAATATCTTATTTCTGAATTTGAGCTTAGTAC
CAAACTGTTGCTAGACAATTTTTTTNAATAAAACGAGCACATGCAGTGACCAGT

InterProScan

Gene3D	ARM-like (IPR011989) - T[152-234] 4.0E-5 - T[235-452] 1.8E-22
SUPERFAMILY	ARM-type_fold (IPR016024) - T[152-449] 3.84E-28
SMART	Armadillo (IPR000225) - T[183-225] 0.063 - T[236-279] 28.0 - T[280-322] 8.2 - T[323-365] 23.0 - T[367-409] 3.4

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ARMC6_HUMAN	36.575 %	306	2.49E-99