- Transcript 'Boleac.CG.SB_v3.S176...' >
- Transcript 'KH2012:KH.C13.103.v1...' >
- Transcript 'Cisavi.CG.ENS81.R558...' >
- Transcript 'Boleac.CG.SB_v3.S461...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S461.g10159.01.t
Possible name(s)
DHX29; DHX36; DHX37
Gene model
Location
S461 [18,785 / 27,751]
Amino acid sequence
Length: 1,224
>Boleac.CG.SB_v3.S461.g10159.01.p
MPRRKKKYGEAVEATTNTSSIKTELSDATQGSYTGTSAKDTNVLVMDSVKSKSSGMKVSG
PNRPKKLSKKQRKKFQRVLDQKEKKAKRADLLNKLAMVQVDASELACMSSIAHLGTRNSN
LQLSKRPLPKDLKQAVENLNSIRGSKKRRKIEKETDEVVNDSPDTSDISLSSDDEEKMEN
EVTDIADVEFKDEKEDTSTEKDMDEAPTESSRADKEHSTVEENQNPQPKPPTLPMFPTVY
VPLQRDEEIQNHRLSLPILGEEQAIMEAIQHNHTVVLCGETGSGKTTQVPQFLYEAGFAN
QGMIGVTEPRRVAAISMSQRVANEMNLPTSKVSYQIRYEGNVTEDTAVKFMTDGVLLREI
QTDFLLSKYSAIIIDEAHERSVYTDVLIGLLSRIVPLRNKCMSELFFQKGNPMRLIIMSA
TLRVEDFTKNTRLFKVAPPVLRVDTRQHPVTVHFNKKTPIDCNGKPYIREAYKKICKVHR
TLPAGGILVFVTGQNEVHSLCKMLKCTFPVKPQCKNVRQTECDGKKEEVMEESESKESTS
SLPKIDLDSISSLPHEKEEEHNDEQEDRDAPADWSDEDDLESDDELMVLSDADFSKEFDK
TLPMHVLPLYSLLAPARQRDVFKPPPEDTRLCIIATNVAETSLTIPGIKYVIDTGKVTGI
SSFQITWVSKASADQRAGRSGRVGPGHAYRLYSSAVFQDFSDFSTPEIVSKPVPGLVLQM
KQMNIERVVXFPFPTPPSLESLKAAEDMLIALGAVKKPTRNKGHPNKLDHYSGRITDLGK
AMALFPVHPRFSKMLATASAKEHLEILPYVIALVAALTVREVFVEQMQPPSSFEEKEQHK
HLAARLSHMKSIWAGGSNETAKLFGDLMVLXGAIGSAEYTGLTPSLCSQNCLRYKALMEI
RKLRSQLINIVNSVNDESSVCLSAKMEPPDNNQAYSFHIRYKALMEIRKLRSQLINIVNS
VNDESSVCLSAKMEPPDNNQITXLRQVVLSAMGDHVARKIPDSQIKNLDDAKEVRRLTGA
YSCLLTTEPVFIHPTSIYFQNSKLPEYIVFQELIETNKLYMKGVMTIDPEWLSKFCPQYC
TFSEPLEEPSPFLENKTGKVHCHARATYGRLSWPLSDAVIVYPPGLNRYKWFARFMLQEC
IVKFLPRQFSLLLSKPDIMTRSWANLQPRTQSMLQALIKEEVDDQSKLLLTWKRNPTFLM
EEFQQWLPESVREDLPPHWPPEVR
Nucleotide sequence
Length: 3,865
>Boleac.CG.SB_v3.S461.g10159.01.t
TCAGGTAATAATACAGTCGCTAGCTACCGCTTTTGACTAAAGAGTATTCATCTGATTCTG
ATATAGTAAAAAATCCTGACAATAACATGCCCCGACGAAAAAAAAAGTATGGAGAAGCTG
TTGAAGCTACCACTAACACATCTTCTATCAAGACAGAGTTGAGTGATGCTACACAAGGAT
CCTACACAGGAACATCAGCAAAAGACACCAATGTGCTTGTTATGGACTCAGTTAAATCTA
AGTCATCAGGTATGAAAGTTTCAGGGCCTAACCGGCCTAAGAAGCTTAGCAAAAAGCAAA
GAAAAAAGTTTCAGAGAGTGCTGGATCAGAAAGAAAAGAAGGCTAAGAGAGCCGATCTGC
TGAACAAACTTGCTATGGTTCAAGTTGATGCATCGGAACTGGCTTGCATGTCTAGCATAG
CACATCTTGGAACTAGGAATTCTAATCTCCAGCTGTCCAAACGACCATTGCCAAAAGATT
TAAAACAAGCAGTTGAAAATTTGAATAGTATTCGAGGCTCAAAGAAACGAAGAAAGATTG
AAAAAGAAACGGATGAGGTTGTGAACGATAGCCCGGACACAAGTGATATCTCATTATCGT
CAGATGATGAGGAAAAAATGGAAAATGAAGTTACGGATATCGCTGATGTAGAATTCAAAG
ATGAGAAAGAAGATACTTCCACAGAGAAAGATATGGATGAAGCCCCAACTGAGAGCAGTC
GTGCGGATAAGGAACATTCCACCGTAGAAGAAAATCAGAATCCTCAACCGAAACCTCCAA
CATTACCCATGTTTCCGACTGTCTACGTTCCATTACAAAGAGATGAAGAAATTCAAAATC
ATAGACTAAGTCTACCTATCCTTGGAGAAGAACAGGCAATAATGGAGGCCATACAACATA
ACCATACTGTAGTTCTTTGTGGTGAAACAGGGTCAGGAAAGACAACTCAAGTGCCACAAT
TTCTTTATGAAGCAGGCTTTGCCAATCAAGGCATGATTGGGGTGACAGAACCGCGCAGGG
TGGCTGCCATAAGTATGTCTCAAAGAGTTGCTAACGAAATGAACTTACCAACGAGCAAAG
TATCATATCAAATTAGGTATGAGGGAAATGTGACTGAAGATACAGCTGTGAAGTTCATGA
CCGACGGTGTTTTGCTTCGGGAAATTCAAACAGATTTTCTGCTTTCAAAGTACTCTGCCA
TCATAATCGATGAGGCTCATGAAAGAAGTGTATATACGGACGTTTTAATTGGCCTGTTGT
CTCGCATTGTGCCGTTGCGAAACAAATGCATGAGTGAACTATTTTTCCAGAAGGGAAATC
CAATGAGATTGATTATAATGTCAGCAACTCTACGTGTTGAAGATTTCACAAAGAATACAA
GATTGTTCAAGGTTGCACCTCCTGTGTTGCGGGTTGATACGAGACAACATCCAGTTACAG
TTCACTTCAATAAGAAGACTCCAATTGACTGCAACGGCAAACCTTATATCAGAGAAGCAT
ACAAAAAGATATGCAAAGTTCATCGCACTCTACCAGCTGGTGGTATCTTGGTTTTTGTCA
CTGGGCAAAATGAGGTTCACTCTTTATGCAAGATGCTAAAATGTACATTTCCTGTGAAAC
CACAGTGTAAAAATGTCCGTCAAACTGAATGTGATGGTAAAAAAGAAGAGGTAATGGAAG
AGAGTGAAAGCAAAGAGTCAACTTCCTCCCTTCCCAAAATTGATCTTGACTCTATTTCAT
CCCTTCCCCATGAAAAAGAAGAGGAACACAATGATGAACAAGAGGATAGAGATGCTCCTG
CAGACTGGTCTGATGAAGACGACTTGGAATCGGATGATGAACTTATGGTACTGAGCGATG
CTGATTTTTCCAAGGAATTTGATAAAACTCTTCCCATGCACGTATTGCCGTTATACTCAT
TATTAGCACCTGCAAGGCAGCGTGATGTATTCAAACCACCTCCAGAGGATACCAGGCTCT
GTATCATTGCGACAAATGTTGCTGAGACATCTCTGACAATACCGGGAATCAAATATGTAA
TAGATACAGGAAAAGTAACTGGAATATCATCATTCCAAATCACGTGGGTGTCCAAAGCTT
CAGCTGATCAAAGAGCTGGGCGTTCTGGCAGAGTCGGACCTGGGCATGCTTATCGNTTGT
ATTCATCTGCTGTGTTTCAAGATTTCAGTGATTTCTCAACTCCAGAAATTGTCTCAAAAC
CTGTTCCTGGTTTGGTGCTTCAGATGAAGCAAATGAACATTGAAAGAGTGGTAAANTTTC
CTTTTCCAACTCCACCTTCATTAGAGTCCTTGAAAGCAGCTGAAGACATGCTTATTGCAC
TGGGTGCTGTTAAAAAACCGACAAGGAACAAGGGACACCCAAATAAATTAGATCACTACA
GTGGTCGTATCACGGATTTGGGAAAAGCGATGGCTCTGTTTCCAGTCCATCCTAGATTCA
GCAAGATGCTTGCGACGGCATCTGCAAAAGAACATCTTGAAATTTTACCATACGTCATAG
CACTTGTTGCAGCGTTGACTGTCAGGGAGGTATTTGTTGAGCAAATGCAGCCACCATCTT
CATTTGAAGAGAAAGAACAACATAAACATCTAGCGGCAAGATTATCTCATATGAAATCAA
TTTGGGCTGGAGGATCAAATGAGACTGCCAAGCTCTTTGGTGATTTGATGGTGCTTNTGG
GAGCTATAGGCTCGGCAGAATACACAGGATTAACACCAAGCTTATGTAGTCAGAACTGTC
TCAGGTATAAAGCTTTGATGGAAATTCGAAAGTTGCGTTCTCAATTGATAAATATTGTCA
ATTCGGTTAATGATGAAAGCAGCGTTTGTTTAAGTGCAAAAATGGAACCGCCGGATAACA
ATCAGGCCTACTCTTTCCACATCCGGTATAAAGCTTTGATGGAAATTCGAAAGTTGCGTT
CTCAATTGATAAATATTGTCAATTCGGTTAATGATGAAAGCAGCGTTTGTTTAAGTGCAA
AAATGGAACCGCCGGATAACAATCAGATTACANTATTGCGTCAAGTAGTGTTGTCTGCCA
TGGGTGATCATGTCGCAAGGAAAATTCCAGATAGTCAAATAAAAAATTTGGATGATGCCA
AAGAGGTCAGGCGATTGACAGGAGCTTACAGCTGTCTTCTCACTACTGAACCAGTCTTCA
TCCATCCGACTTCAATATATTTTCAAAATTCAAAACTACCAGAATACATAGTATTTCAGG
AATTGATTGAAACAAACAAACTGTACATGAAAGGTGTCATGACTATCGACCCCGAGTGGC
TTTCCAAGTTTTGTCCTCAGTATTGCACTTTCTCAGAACCTTTGGAAGAACCCAGCCCTT
TCTTGGAAAACAAAACTGGAAAAGTGCATTGTCATGCTAGAGCAACTTATGGTCGTCTGT
CATGGCCTTTGAGCGATGCTGTCATAGTGTACCCACCTGGTTTGAATCGGTACAAATGGT
TCGCCCGTTTTATGCTACAAGAATGCATCGTCAAATTTCTGCCAAGACAGTTCAGCCTAC
TGCTGTCAAAACCAGATATAATGACAAGATCTTGGGCAAACTTGCAACCTCGTACCCAGT
CCATGCTTCAAGCGCTTATTAAAGAAGAAGTTGATGATCAGTCTAAGCTGCTTCTAACAT
GGAAAAGAAATCCTACATTTTTGATGGAAGAATTTCAGCAATGGTTGCCAGAATCAGTTC
GAGAAGATTTACCTCCTCACTGGCCACCGGAAGTGCGATGATCGTGGCATTCTTCTTACG
GATAGGTTGACTGCTTCGAAGAACCATAGGAAACTTGTCTTGACGCTCGCACTTTTCAAC
AAGTCACATTTCACGGACCCGTTGT
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[251-507] 7.06E-82 - T[597-860] 7.06E-82 - T[892-910] 7.06E-82 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[254-453] 2.1E-24 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[264-427] 2.1E-7 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[266-440] 20.242 |
| ProSitePatterns |
DNA/RNA_helicase_DEAH_CS (IPR002464) - T[370-379] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[576-724] 11.988 |
| SMART |
Helicase_C (IPR001650) - T[596-684] 1.6E-14 |
| Pfam |
Helicase_C (IPR001650) - T[598-684] 7.8E-9 |
| SMART |
Helicase-assoc_dom (IPR007502) - T[744-871] 2.6E-16 |
| Pfam |
Helicase-assoc_dom (IPR007502) - T[745-869] 6.8E-20 |
| Pfam |
DUF1605 (IPR011709) - T[984-1079] 7.5E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DHX29_HUMAN | 28.085 % | 223 | 3.97E-59 |
| DHX36_HUMAN | 29.076 % | 209 | 3.4E-55 |
| DHX37_HUMAN | 49.653 % | 939 | 0 |