- Transcript 'Boleac.CG.SB_v3.S456...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S456.g10063.01.t
Possible name(s)
SHMT1; SHMT2
Gene model
Location
S456 [15,669 / 18,816]
Amino acid sequence
Length: 471
>Boleac.CG.SB_v3.S456.g10063.01.p
MSDKESRAWLEDPLEKDDEDVFNIIRKEKERQRSGLELIASENFASAAVLQALGSCLNNK
YSEGYPGVRYYGGTEYIDELERLCQKRALEVFKLESDKWSVNVQPYSGSPANFAVFTAIA
QPHGRIMGLDLPDGGHLTHGFMTDKKKVSATSIFFESMPYKVHQDTGYIDYDRLAENARL
FKPKIIIAGVSCYSRHLDYKRMKEIANENNAYLMADMAHISGLVAAGIIPSPFEYCDIVT
TTTHKTLRGPRSGMIFCRKGVRKVLASGKEEMYNLEKPINEAVFPGLQGGPHNHAIAGVA
VALKQAMTEEFIADQKQTITNAKHMAKLLVEKGYNVVTGGTENHLMLVNLKNKGTDGNRA
DKTLEAIGIACNKNSCPGDTSALRPSGLRLGTPALTSRGLREHHFNKVVDFIDRGVQLTL
DIQNSLGPKATFKDFKDKLYRDAKFVERVATLKEEVAAFASQFPXPGLATM
Nucleotide sequence
Length: 1,624
>Boleac.CG.SB_v3.S456.g10063.01.t
TCTGTGGTTCAGAATCTTTTGATAATAATTAGCTAATATAAAAATGAGTGATAAAGAAAG
CCGAGCATGGTTGGAAGATCCCCTAGAGAAGGATGATGAAGATGTCTTCAATATAATACG
CAAAGAAAAAGAAAGGCAACGTTCTGGACTCGAGCTAATTGCGTCAGAGAATTTTGCCAG
TGCAGCAGTATTGCAAGCTTTGGGATCATGTTTAAACAATAAGTATTCTGAAGGATATCC
TGGAGTGCGCTATTACGGAGGAACCGAATATATTGATGAGCTGGAGCGTCTTTGCCAAAA
GCGAGCTCTTGAAGTGTTTAAATTAGAAAGTGACAAATGGAGCGTAAATGTGCAGCCCTA
CTCTGGATCCCCAGCCAATTTTGCTGTTTTCACAGCGATCGCACAGCCACATGGACGAAT
AATGGGACTTGACTTACCGGATGGTGGTCATTTAACTCATGGCTTCATGACAGATAAAAA
AAAAGTTTCTGCCACCTCAATATTCTTTGAGTCTATGCCATACAAGGTTCATCAAGACAC
TGGTTATATTGATTATGACAGACTTGCTGAAAACGCAAGACTTTTCAAGCCCAAAATCAT
CATTGCTGGTGTGAGTTGTTACTCCAGACATTTAGATTACAAGAGAATGAAAGAGATTGC
CAACGAGAACAACGCTTATCTCATGGCTGATATGGCTCACATAAGTGGNCTAGTGGCTGC
AGGAATCATACCTTCTCCATTTGAGTATTGTGATATAGTAACAACTACCACTCACAAGAC
ACTTCGGGGCCCACGTTCGGGAATGATCTTCTGTCGCAAGGGTGTCCGTAAAGTCCTTGC
ATCAGGAAAAGAGGAAATGTACAATTTGGAGAAACCCATCAATGAGGCTGTTTTTCCTGG
ACTTCAAGGTGGACCCCATAATCATGCTATTGCTGGGGTTGCTGTAGCTCTCAAACAGGC
AATGACGGAGGAATTCATTGCTGATCAGAAACAGACCATCACCAATGCTAAACACATGGC
AAAATTGCTTGTTGAGAAGGGGTACAACGTTGTCACTGGGGGCACGGAAAATCATCTTAT
GTTAGTCAACTTGAAAAACAAGGGTACAGATGGAAACAGAGCTGATAAAACTCTAGAAGC
CATCGGAATTGCATGCAATAAAAATTCATGTCCAGGCGATACTTCGGCTTTGAGGCCAAG
TGGACTTCGACTTGGCACTCCTGCCTTGACATCAAGAGGTCTGCGTGAGCACCACTTTAA
CAAAGTCGTCGACTTCATTGACCGTGGAGTGCAGTTGACTTTGGATATTCAGAATTCATT
GGGGCCAAAAGCTACTTTTAAGGATTTCAAAGACAAACTGTACAGAGATGCCAAATTTGT
CGAGAGAGTTGCGACTTTGAAAGAGGAAGTGGCAGCTTTCGCTTCACAATTTCCCNTTCC
TGGTTTAGCCACAATGTAATGGATAGCTTTAAGCGCTTGCGGTCACCATACATTTTCCTC
ACTGAATACTGCTGCCAATTNCAGATACTCCAACNATCACGTACCATCTCATGTTCTTGA
TTCTCGCAATTTCAAATAATTTCGTTCATAATGTTTACTGAAACTAAATTAATGTTCCCG
AAAA
| PIRSF |
Ser_HO-MeTrfase (IPR001085) - T[1-471] 8.4E-176 |
| SUPERFAMILY |
PyrdxlP-dep_Trfase (IPR015424) - T[9-467] 2.21E-181 |
| Hamap |
Ser_HO-MeTrfase (IPR001085) - T[13-467] 43.277 |
| CDD |
Ser_HO-MeTrfase (IPR001085) - T[15-459] 0.0 |
| Gene3D |
PyrdxlP-dep_Trfase_dom1 (IPR015422) - T[18-42] 5.3E-210 - T[317-466] 5.3E-210 |
| Gene3D |
PyrdxlP-dep_Trfase_major (IPR015421) - T[43-316] 5.3E-210 |
| ProSitePatterns |
Ser_HO-MeTrfase_PLP_BS (IPR019798) - T[237-253] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLYC_HUMAN | 71.739 % | 671 | 0 |
| GLYM_HUMAN | 60.645 % | 591 | 0 |