The Genome Browser is currently unreachable. Sorry for the inconvenience. Please try again soon.
Login
Help

Submit your Data

  1. Transcript 'Boleac.CG.SB_v3.S442...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S442.g09842.01.t

Possible name(s)

LRRD1; LRRIQ4; MFHAS1

Location

S442 [89,819 / 92,944]

Sequences

Amino acid sequence

Length: 550

>Boleac.CG.SB_v3.S442.g09842.01.p
MTSHGKRNSKFLMVNEGAGSRSFSEPSTRRNTASFLPSVALSDISLRQFRAERHSRGGEP
WHSSTTIRHDYIPSVSSMSTISTERKTAKLEKIEQPTFRVEGSDLNDLPKTIFKMENLEK
LVLSPDKDSCTYSKLPSIPKEVSNLKYLRQLVLDTNELEEIPQQLADLKYLDTLTLSNNH
LTSLPDGFSNLEKLESLHLANNRFTSIPIEICLLENLTFLDMSDNLIQDIPEEIYLLADK
LSTLILYINELEDLPDCICDLYELTTLWLERHSRGGEPWHSSTTIRHDYIPSVSSMSTIS
TERKTAKLEKIEQPTFRVEGSDLNDLPKTIFKMENLEKLVLSPDKDSCTYSKLPSIPKEV
SNLKYLRQLVLDTNELEEIPQQLADLKYLDTLTLSNNHLTSLPDGFSNLEKLESLHLANN
RFTSIPIEICLLENLTFLDMSDNLIQDIPEEIYLLADKLSTLIXYINELEDLPDCICDLY
ELTTLWLGRNHLNCLPTRFGDLEHLDWGDNPAETNIDDNPLITPPIEVCRKGIIAIRKYF
SAFSQLADGE

Nucleotide sequence

Length: 1,653

>Boleac.CG.SB_v3.S442.g09842.01.t
ATGACTTCCCACGGTAAAAGGAATTCAAAATTCTTGATGGTTAACGAAGGGGCCGGCAGT
AGGAGCTTTTCAGAGCCTTCAACAAGACGAAACACGGCCAGTTTTCTACCTTCGGTGGCG
CTTAGTGATATATCACTACGACAATTCAGGGCAGAACGACATAGCCGGGGAGGGGAGCCC
TGGCATTCGTCCACAACAATACGACACGATTACATACCATCAGTAAGCTCAATGTCAACA
ATATCAACGGAACGAAAAACNGCAAAACTGGAAAAAATTGAGCAACCGACTTTCCGAGTG
GAAGGATCAGACTTGAACGATCTACCAAAGACTATTTTCAAAATGGAAAATTTGGAAAAA
TTAGTCCTTAGTCCAGATAAGGACTCTTGTACATATTCAAAATTGCCAAGCATCCCAAAA
GAAGTCAGTAATCTAAAGTATTTACGGCAACTGGTCCTCGATACAAATGAGTTGGAAGAA
ATTCCGCAACAACTCGCTGACTTGAAGTATTTGGACACGTTAACTCTAAGTAACAATCAT
TTAACCTCACTACCCGACGGATTCTCCAACTTAGAGAAACTGGAGAGCTTACATCTTGCA
AACAACAGATTCACGAGTATTCCGATCGAGATTTGTCTTTTGGAAAACCTTACATTTCTT
GACATGAGTGACAATCTCATCCAAGACATCCCAGAAGAGATTTATCTTCTAGCTGACAAA
CTATCGACTTTGATATTATATATCAACGAGTTGGAGGATCTGCCAGATTGTATATGCGAT
CTATACGAATTGACAACGCTATGGCTCGAACGACATAGCCGGGGAGGGGAGCCCTGGCAT
TCGTCCACAACAATACGACACGATTACATACCATCAGTAAGCTCAATGTCAACAATATCA
ACGGAACGAAAAACAGCAAAACTGGAAAAAATTGAGCAACCGACTTTCCGAGTGGAAGGA
TCAGACTTGAACGATCTACCAAAGACTATTTTCAAAATGGAAAATTTGGAAAAATTAGTC
CTTAGTCCAGATAAGGACTCTTGTACATATTCAAAATTGCCAAGCATCCCAAAAGAAGTC
AGTAATCTAAAGTATTTACGGCAACTGGTCCTCGATACAAATGAGTTGGAAGAAATTCCG
CAACAACTCGCTGACTTGAAGTATTTGGACACGTTAACTCTAAGTAACAATCATTTAACC
TCACTACCCGACGGATTCTCCAACTTAGAGAAACTGGAGAGCTTACATCTTGCAAACAAC
AGATTCACGAGTATTCCGATCGAGATTTGTCTTTTGGAAAACCTTACATTTCTTGACATG
AGTGACAATCTCATCCAAGACATCCCAGAAGAGATTTATCTTCTAGCTGACAAACTATCG
ACTTTGATATTNTATATCAACGAGTTGGAGGATCTGCCAGATTGTATATGCGATCTATAC
GAATTGACAACGCTATGGCTCGGAAGAAACCACTTGAATTGCTTGCCAACGAGATTCGGA
GATCTTGAACACTTGGATTGGGGAGATAACCCTGCCGAGACTAACATCGATGACAATCCG
CTTATCACACCTCCAATCGAAGTCTGCAGAAAAGGAATCATCGCCATCAGGAAGTACTTT
TCTGCTTTTTCACAATTAGCCGATGGAGAGTGA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[72-291] 3.1E-36 - T[292-530] 1.6E-39
SMART
Leu-rich_rpt_typical-subtyp (IPR003591) - T[145-167] 88.0 - T[168-190] 0.7 - T[191-213] 5.5 - T[214-237] 0.23 - T[240-261] 260.0 - T[363-385] 88.0 - T[386-408] 0.7 - T[409-431] 5.5 - T[432-455] 0.23 - T[479-502] 4.8
ProSiteProfiles
Leu-rich_rpt (IPR001611) - T[147-169] 6.11 - T[170-192] 7.55 - T[193-214] 8.105 - T[216-237] 8.728 - T[240-261] 5.664 - T[365-387] 6.11 - T[388-410] 7.55 - T[411-432] 8.105 - T[434-455] 8.728 - T[458-479] 4.716 - T[481-503] 5.733
Pfam
Leu-rich_rpt (IPR001611) - T[148-204] 6.7E-10 - T[366-422] 6.8E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LRRD1_HUMAN 28.306 % 142 6.06E-36
LRIQ4_HUMAN 27.293 % 134 9.94E-34
MFHA1_HUMAN 32.095 % 136 7.66E-34





By clicking "SEND", you accept the terms of our Privacy Policy.

You may choose to prevent this website from aggregating and analyzing the actions you take here. Doing so will protect your privacy, but will also prevent the owner from learning from your actions and creating a better experience for you and other users.