- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Boleac.CG.SB_v3.S442...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S442.g09842.01.t
Possible name(s)
LRRD1; LRRIQ4; MFHAS1
Gene model
Location
S442 [89,819 / 92,944]
Amino acid sequence
Length: 550
>Boleac.CG.SB_v3.S442.g09842.01.p
MTSHGKRNSKFLMVNEGAGSRSFSEPSTRRNTASFLPSVALSDISLRQFRAERHSRGGEP
WHSSTTIRHDYIPSVSSMSTISTERKTAKLEKIEQPTFRVEGSDLNDLPKTIFKMENLEK
LVLSPDKDSCTYSKLPSIPKEVSNLKYLRQLVLDTNELEEIPQQLADLKYLDTLTLSNNH
LTSLPDGFSNLEKLESLHLANNRFTSIPIEICLLENLTFLDMSDNLIQDIPEEIYLLADK
LSTLILYINELEDLPDCICDLYELTTLWLERHSRGGEPWHSSTTIRHDYIPSVSSMSTIS
TERKTAKLEKIEQPTFRVEGSDLNDLPKTIFKMENLEKLVLSPDKDSCTYSKLPSIPKEV
SNLKYLRQLVLDTNELEEIPQQLADLKYLDTLTLSNNHLTSLPDGFSNLEKLESLHLANN
RFTSIPIEICLLENLTFLDMSDNLIQDIPEEIYLLADKLSTLIXYINELEDLPDCICDLY
ELTTLWLGRNHLNCLPTRFGDLEHLDWGDNPAETNIDDNPLITPPIEVCRKGIIAIRKYF
SAFSQLADGE
Nucleotide sequence
Length: 1,653
>Boleac.CG.SB_v3.S442.g09842.01.t
ATGACTTCCCACGGTAAAAGGAATTCAAAATTCTTGATGGTTAACGAAGGGGCCGGCAGT
AGGAGCTTTTCAGAGCCTTCAACAAGACGAAACACGGCCAGTTTTCTACCTTCGGTGGCG
CTTAGTGATATATCACTACGACAATTCAGGGCAGAACGACATAGCCGGGGAGGGGAGCCC
TGGCATTCGTCCACAACAATACGACACGATTACATACCATCAGTAAGCTCAATGTCAACA
ATATCAACGGAACGAAAAACNGCAAAACTGGAAAAAATTGAGCAACCGACTTTCCGAGTG
GAAGGATCAGACTTGAACGATCTACCAAAGACTATTTTCAAAATGGAAAATTTGGAAAAA
TTAGTCCTTAGTCCAGATAAGGACTCTTGTACATATTCAAAATTGCCAAGCATCCCAAAA
GAAGTCAGTAATCTAAAGTATTTACGGCAACTGGTCCTCGATACAAATGAGTTGGAAGAA
ATTCCGCAACAACTCGCTGACTTGAAGTATTTGGACACGTTAACTCTAAGTAACAATCAT
TTAACCTCACTACCCGACGGATTCTCCAACTTAGAGAAACTGGAGAGCTTACATCTTGCA
AACAACAGATTCACGAGTATTCCGATCGAGATTTGTCTTTTGGAAAACCTTACATTTCTT
GACATGAGTGACAATCTCATCCAAGACATCCCAGAAGAGATTTATCTTCTAGCTGACAAA
CTATCGACTTTGATATTATATATCAACGAGTTGGAGGATCTGCCAGATTGTATATGCGAT
CTATACGAATTGACAACGCTATGGCTCGAACGACATAGCCGGGGAGGGGAGCCCTGGCAT
TCGTCCACAACAATACGACACGATTACATACCATCAGTAAGCTCAATGTCAACAATATCA
ACGGAACGAAAAACAGCAAAACTGGAAAAAATTGAGCAACCGACTTTCCGAGTGGAAGGA
TCAGACTTGAACGATCTACCAAAGACTATTTTCAAAATGGAAAATTTGGAAAAATTAGTC
CTTAGTCCAGATAAGGACTCTTGTACATATTCAAAATTGCCAAGCATCCCAAAAGAAGTC
AGTAATCTAAAGTATTTACGGCAACTGGTCCTCGATACAAATGAGTTGGAAGAAATTCCG
CAACAACTCGCTGACTTGAAGTATTTGGACACGTTAACTCTAAGTAACAATCATTTAACC
TCACTACCCGACGGATTCTCCAACTTAGAGAAACTGGAGAGCTTACATCTTGCAAACAAC
AGATTCACGAGTATTCCGATCGAGATTTGTCTTTTGGAAAACCTTACATTTCTTGACATG
AGTGACAATCTCATCCAAGACATCCCAGAAGAGATTTATCTTCTAGCTGACAAACTATCG
ACTTTGATATTNTATATCAACGAGTTGGAGGATCTGCCAGATTGTATATGCGATCTATAC
GAATTGACAACGCTATGGCTCGGAAGAAACCACTTGAATTGCTTGCCAACGAGATTCGGA
GATCTTGAACACTTGGATTGGGGAGATAACCCTGCCGAGACTAACATCGATGACAATCCG
CTTATCACACCTCCAATCGAAGTCTGCAGAAAAGGAATCATCGCCATCAGGAAGTACTTT
TCTGCTTTTTCACAATTAGCCGATGGAGAGTGA
| Gene3D |
LRR_dom_sf (IPR032675) - T[72-291] 3.1E-36 - T[292-530] 1.6E-39 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[145-167] 88.0 - T[168-190] 0.7 - T[191-213] 5.5 - T[214-237] 0.23 - T[240-261] 260.0 - T[363-385] 88.0 - T[386-408] 0.7 - T[409-431] 5.5 - T[432-455] 0.23 - T[479-502] 4.8 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[147-169] 6.11 - T[170-192] 7.55 - T[193-214] 8.105 - T[216-237] 8.728 - T[240-261] 5.664 - T[365-387] 6.11 - T[388-410] 7.55 - T[411-432] 8.105 - T[434-455] 8.728 - T[458-479] 4.716 - T[481-503] 5.733 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[148-204] 6.7E-10 - T[366-422] 6.8E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRRD1_HUMAN | 28.306 % | 142 | 6.06E-36 |
| LRIQ4_HUMAN | 27.293 % | 134 | 9.94E-34 |
| MFHA1_HUMAN | 32.095 % | 136 | 7.66E-34 |